RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
VMA21-201ENST00000330374 STX1AQ16623 288 aa9.23□□□□□ -0.93
VMA21-201ENST00000330374 TMC6Q7Z403 805 aa9.23□□□□□ -0.93
VMA21-201ENST00000330374 FSIP1Q8NA03 581 aa9.23□□□□□ -0.93
VMA21-201ENST00000330374 IGSF1Q8N6C5 1336 aa9.23□□□□□ -0.93
VMA21-201ENST00000330374 SLU7O95391 586 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 RBM6P78332 1123 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 SASH1O94885 1247 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 RAB11FIP4Q86YS3 637 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 CCAR2Q8N163 923 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 TUBGCP6Q96RT7 1819 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 TSPYL2Q9H2G4 693 aaPredicted RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 BICC1Q9H694 974 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 PEAK1Q9H792 1746 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 A0A1B0GVL5 298 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 BTBD11A6QL63 1104 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 HTATSF1O43719 755 aaKnown RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 RESTQ13127 1097 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 OTUD7BQ6GQQ9 843 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 SUCLG2Q96I99 432 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 USP28Q96RU2 1077 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 OVOS2A0A0J9YW53 1432 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 OVOS2Q6IE36 1432 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 CCZ1BP86790 482 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 CCZ1P86791 482 aaPredicted RBP9.22□□□□□ -0.93
VMA21-201ENST00000330374 ABTB2Q8N961 1025 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 NEK1Q96PY6 1258 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 CFAP45Q9UL16 551 aa9.22□□□□□ -0.93
VMA21-201ENST00000330374 USP6P35125 1406 aa9.21□□□□□ -0.93
VMA21-201ENST00000330374 HOXC9P31274 260 aa9.21□□□□□ -0.93
VMA21-201ENST00000330374 EIF4A1P60842 406 aaKnown RBP9.21□□□□□ -0.93
VMA21-201ENST00000330374 APOBRQ0VD83 1088 aa9.21□□□□□ -0.93
VMA21-201ENST00000330374 TMEM51Q9NW97 253 aa9.21□□□□□ -0.93
VMA21-201ENST00000330374 SBNO1A3KN83 1393 aa9.21□□□□□ -0.93
VMA21-201ENST00000330374 ERO1AQ96HE7 468 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 GOLGA8FQ08AF8 430 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 GOLGA8DPQ0D2H9 430 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 SYCP1Q15431 976 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 SF3A1Q15459 793 aaKnown RBP9.21□□□□□ -0.94
VMA21-201ENST00000330374 DDX46Q7L014 1031 aaKnown RBP9.21□□□□□ -0.94
VMA21-201ENST00000330374 CEP57L1Q8IYX8 460 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 ZNF446Q9NWS9 450 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 IFNKQ9P0W0 207 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 SERPINA10Q9UK55 444 aa9.21□□□□□ -0.94
VMA21-201ENST00000330374 CCDC66A2RUB6 948 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 PIP4K2AP48426 406 aaPredicted RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 SCRN1Q12765 414 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 ARHGAP29Q52LW3 1261 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 NOL10Q9BSC4 688 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 EPC1Q9H2F5 836 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 POLR3DP05423 398 aaPredicted RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 MYL6BP14649 208 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 HSP90AA4PQ58FG1 418 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 ERC1Q8IUD2 1116 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 DHX40Q8IX18 779 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 PDE4CQ08493 712 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 NYAP1Q6ZVC0 841 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 ANO10Q9NW15 660 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 DNAI1Q9UI46 699 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 ZNF330Q9Y3S2 320 aaPredicted RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 HIP1O00291 1037 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 IRX5P78411 483 aaPredicted RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 RBM43Q6ZSC3 357 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 LRRC59Q96AG4 307 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 MRFAP1L1Q96HT8 127 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 XPO4Q9C0E2 1151 aaKnown RBP9.2□□□□□ -0.94
VMA21-201ENST00000330374 ADCY9O60503 1353 aa9.2□□□□□ -0.94
VMA21-201ENST00000330374 TAF5LO75529 589 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 LMOD1P29536 600 aaPredicted RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 ZNF530Q6P9A1 599 aaPredicted RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 TIGD1Q96MW7 591 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 PDE4DQ08499 809 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 TAF3Q5VWG9 929 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 XRN1Q8IZH2 1706 aaKnown RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 A0A0G2JLW4 131 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 PTPDC1A2A3K4 754 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 SEC31AO94979 1220 aaKnown RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 SFPQP23246 707 aaKnown RBP eCLIP9.19□□□□□ -0.94
VMA21-201ENST00000330374 GNL2Q13823 731 aaKnown RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 DPCR1Q3MIW9 517 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 KCNB2Q92953 911 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 C3P01024 1663 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
VMA21-201ENST00000330374 URI1O94763 535 aaPredicted RBP9.19□□□□□ -0.94
VMA21-201ENST00000330374 ITSN1Q15811 1721 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 KDRP35968 1356 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 NEMFO60524 1076 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 CYP21A2P08686 494 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 CLCN6P51797 869 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
VMA21-201ENST00000330374 E4F1Q66K89 784 aaPredicted RBP9.18□□□□□ -0.94
VMA21-201ENST00000330374 RIC3Q7Z5B4 369 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 NEK11Q8NG66 645 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 RIMBP3CA6NJZ7 1639 aa9.18□□□□□ -0.94
VMA21-201ENST00000330374 RIMBP3BA6NNM3 1639 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms