RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 ABL1P00519 1130 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 SERPINB4P48594 390 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
SKP1-201ENST00000328392 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 OR13H1Q8NG92 308 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 FRRS1LQ9P0K9 344 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
SKP1-201ENST00000328392 FNDC3AQ9Y2H6 1198 aaKnown RBP6.97□□□□□ -1.29
SKP1-201ENST00000328392 A0A0A0MRY4 1105 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 PDGFAP04085 211 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 HOXD8P13378 290 aaPredicted RBP6.96□□□□□ -1.3
SKP1-201ENST00000328392 ARID4AP29374 1257 aaPredicted RBP6.96□□□□□ -1.3
SKP1-201ENST00000328392 SOX18P35713 384 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 PLD4Q96BZ4 506 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 ELP3Q9H9T3 547 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 CNTN3Q9P232 1028 aa6.96□□□□□ -1.3
SKP1-201ENST00000328392 NPR3P17342 541 aa6.95□□□□□ -1.3
SKP1-201ENST00000328392 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
SKP1-201ENST00000328392 TTC39BQ5VTQ0 682 aaPredicted RBP6.95□□□□□ -1.3
SKP1-201ENST00000328392 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
SKP1-201ENST00000328392 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
SKP1-201ENST00000328392 POLIQ9UNA4 740 aa6.95□□□□□ -1.3
SKP1-201ENST00000328392 MZF1P28698 734 aaPredicted RBP6.94□□□□□ -1.3
SKP1-201ENST00000328392 BAG6P46379 1132 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 ATP11AP98196 1134 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 C8orf34Q49A92 452 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 TMCO4Q5TGY1 634 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 ZNF438Q7Z4V0 828 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 TTC9Q92623 222 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 CCDC87Q9NVE4 849 aa6.94□□□□□ -1.3
SKP1-201ENST00000328392 ABI2Q9NYB9 513 aaPredicted RBP6.94□□□□□ -1.3
SKP1-201ENST00000328392 PATL2C9JE40 543 aaKnown RBP6.93□□□□□ -1.3
SKP1-201ENST00000328392 FZD6O60353 706 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 GHRHP01286 108 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 AAMPQ13685 434 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
SKP1-201ENST00000328392 PDE12Q6L8Q7 609 aaKnown RBP6.93□□□□□ -1.3
SKP1-201ENST00000328392 SHISA2Q6UWI4 295 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 ADAMTSL4Q6UY14 1074 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 FMR1NBQ8N0W7 255 aaPredicted RBP6.93□□□□□ -1.3
SKP1-201ENST00000328392 C1orf127Q8N9H9 656 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 KANSL3Q9P2N6 904 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 TRIM33Q9UPN9 1127 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 MTMR7Q9Y216 660 aa6.93□□□□□ -1.3
SKP1-201ENST00000328392 FAM13AO94988 1023 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 APBA3O96018 575 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 SELPP16109 830 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 HYAL2Q12891 473 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 SF3B2Q13435 895 aaKnown RBP6.92□□□□□ -1.3
SKP1-201ENST00000328392 ECM1Q16610 540 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 ALKBH2Q6NS38 261 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 TXNDC2Q86VQ3 553 aa6.92□□□□□ -1.3
SKP1-201ENST00000328392 BIN2Q9UBW5 565 aaPredicted RBP6.92□□□□□ -1.3
SKP1-201ENST00000328392 ICMTO60725 284 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 DEAF1O75398 565 aaPredicted RBP6.91□□□□□ -1.3
SKP1-201ENST00000328392 ACPPP15309 386 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 ELNP15502 786 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 RAC1P63000 192 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 SUZ12Q15022 739 aaKnown RBP6.91□□□□□ -1.3
SKP1-201ENST00000328392 XKR5Q6UX68 686 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 RASSF4Q9H2L5 321 aa6.91□□□□□ -1.3
SKP1-201ENST00000328392 KIF4AO95239 1232 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 FURINP09958 794 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 PCSK2P16519 638 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 GATA4P43694 442 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 DOC2BQ14184 412 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 RBSNQ9H1K0 784 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 CHRDQ9H2X0 955 aa6.9□□□□□ -1.3
SKP1-201ENST00000328392 GNEQ9Y223 722 aaKnown RBP6.9□□□□□ -1.3
SKP1-201ENST00000328392 CCDC9Q9Y3X0 531 aaKnown RBP6.9□□□□□ -1.3
SKP1-201ENST00000328392 H3BRB1 525 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 TRPA1O75762 1119 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 RPLP1P05386 114 aaKnown RBP6.89□□□□□ -1.31
SKP1-201ENST00000328392 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 NCAPG2Q86XI2 1143 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 FBXO11Q86XK2 927 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 CEP120Q8N960 986 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 LACRTQ9GZZ8 138 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 TUT1Q9H6E5 874 aaKnown RBP6.89□□□□□ -1.31
SKP1-201ENST00000328392 EGFL7Q9UHF1 273 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
SKP1-201ENST00000328392 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
SKP1-201ENST00000328392 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 CES1P23141 567 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 MFAP1P55081 439 aaKnown RBP6.88□□□□□ -1.31
SKP1-201ENST00000328392 SND1Q7KZF4 910 aaKnown RBP eCLIP6.88□□□□□ -1.312e-12■■□□□ 11.8
SKP1-201ENST00000328392 DTWD1Q8N5C7 304 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 TTC16Q8NEE8 873 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 SPACA7Q96KW9 195 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
SKP1-201ENST00000328392 SOWAHDA6NJG2 315 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 EREGO14944 169 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 CDC25BP30305 580 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 ARHGAP4P98171 946 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 MBTPS1Q14703 1052 aa6.87□□□□□ -1.31
SKP1-201ENST00000328392 TXNDC11Q6PKC3 985 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms