RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 MCM2P49736 904 aa17.19■□□□□ 0.34
CHEK2-201ENST00000328354 KBTBD3Q8NAB2 608 aa17.19■□□□□ 0.34
CHEK2-201ENST00000328354 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
CHEK2-201ENST00000328354 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
CHEK2-201ENST00000328354 AKAP11Q9UKA4 1901 aa17.19■□□□□ 0.34
CHEK2-201ENST00000328354 C4AP0C0L4 1744 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 PTH1RQ03431 593 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 METTL24Q5JXM2 366 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 KRT27Q7Z3Y8 459 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34
CHEK2-201ENST00000328354 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 NEK4P51957 841 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 MAP4K1Q92918 833 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 BCL2L12Q9HB09 334 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
CHEK2-201ENST00000328354 IFIT1P09914 478 aaKnown RBP17.17■□□□□ 0.34
CHEK2-201ENST00000328354 NECTIN1Q15223 517 aa17.17■□□□□ 0.34
CHEK2-201ENST00000328354 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
CHEK2-201ENST00000328354 CCDC152Q4G0S7 254 aa17.17■□□□□ 0.34
CHEK2-201ENST00000328354 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
CHEK2-201ENST00000328354 MROH5Q6ZUA9 1318 aa17.17■□□□□ 0.34
CHEK2-201ENST00000328354 MYH7P12883 1935 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 GNPATO15228 680 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 ADORA1P30542 326 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 DDX46Q7L014 1031 aaKnown RBP17.16■□□□□ 0.34
CHEK2-201ENST00000328354 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
CHEK2-201ENST00000328354 NDUFB9Q9Y6M9 179 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 PDE8BO95263 885 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 RASEFQ8IZ41 740 aa17.16■□□□□ 0.34
CHEK2-201ENST00000328354 RTCBQ9Y3I0 505 aaKnown RBP17.16■□□□□ 0.34
CHEK2-201ENST00000328354 HSP90AA1P07900 732 aaKnown RBP17.15■□□□□ 0.34
CHEK2-201ENST00000328354 GOLIM4O00461 696 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 SLC10A5Q5PT55 438 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 USPL1Q5W0Q7 1092 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 TBC1D9BQ66K14 1250 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 FAM196AQ6ZSG2 479 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 ZNF589Q86UQ0 364 aaPredicted RBP17.14■□□□□ 0.33
CHEK2-201ENST00000328354 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
CHEK2-201ENST00000328354 UBR3Q6ZT12 1888 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 FGFR2P21802 821 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
CHEK2-201ENST00000328354 GORABQ5T7V8 394 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 TM6SF1Q9BZW5 370 aa17.14■□□□□ 0.33
CHEK2-201ENST00000328354 A0A1B0GUL6 1792 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 ZPR1O75312 459 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
CHEK2-201ENST00000328354 TAF5LO75529 589 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 PUM3Q15397 648 aaKnown RBP17.13■□□□□ 0.33
CHEK2-201ENST00000328354 MCMDC2Q4G0Z9 681 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 PRPF40BQ6NWY9 871 aaKnown RBP17.13■□□□□ 0.33
CHEK2-201ENST00000328354 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 HELLSQ9NRZ9 838 aa17.13■□□□□ 0.33
CHEK2-201ENST00000328354 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 LPIN2Q92539 896 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 ARHGEF1Q92888 912 aaKnown RBP17.12■□□□□ 0.33
CHEK2-201ENST00000328354 TTC14Q96N46 770 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 MPHOSPH8Q99549 860 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 UPF3BQ9BZI7 483 aaKnown RBP17.12■□□□□ 0.33
CHEK2-201ENST00000328354 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
CHEK2-201ENST00000328354 CUL4AQ13619 759 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 ZMYM1Q5SVZ6 1142 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 TMX3Q96JJ7 454 aa17.12■□□□□ 0.33
CHEK2-201ENST00000328354 CWC22Q9HCG8 908 aaKnown RBP17.12■□□□□ 0.33
CHEK2-201ENST00000328354 ZKSCAN1P17029 563 aaPredicted RBP17.11■□□□□ 0.33
CHEK2-201ENST00000328354 ADRA2BP18089 450 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 SSFA2P28290 1259 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
CHEK2-201ENST00000328354 LRRFIP1Q32MZ4 808 aaKnown RBP17.11■□□□□ 0.33
CHEK2-201ENST00000328354 TSGA10IPQ3SY00 556 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 COL4A1P02462 1669 aa17.11■□□□□ 0.33
CHEK2-201ENST00000328354 SLC27A2O14975 620 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 RNF113AO15541 343 aaKnown RBP17.1■□□□□ 0.33
CHEK2-201ENST00000328354 ARID4AP29374 1257 aaPredicted RBP17.1■□□□□ 0.33
CHEK2-201ENST00000328354 SCARF1Q14162 830 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 RAB3GAP1Q15042 981 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 SLC27A3Q5K4L6 730 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
CHEK2-201ENST00000328354 CHGBP05060 677 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 FOXD4L1Q9NU39 408 aa17.1■□□□□ 0.33
CHEK2-201ENST00000328354 TAF1P21675 1872 aa17.09■□□□□ 0.33
CHEK2-201ENST00000328354 RPAP1Q9BWH6 1393 aaPredicted RBP17.09■□□□□ 0.33
CHEK2-201ENST00000328354 ZFYP08048 801 aaPredicted RBP17.09■□□□□ 0.33
CHEK2-201ENST00000328354 MCAMP43121 646 aa17.09■□□□□ 0.33
CHEK2-201ENST00000328354 KCNJ4P48050 445 aa17.09■□□□□ 0.33
CHEK2-201ENST00000328354 FKBP4Q02790 459 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHEK2-201ENST00000328354 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
CHEK2-201ENST00000328354 SEC62Q99442 399 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms