RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 AOX1Q06278 1338 aa16.02■□□□□ 0.15
DDX54-202ENST00000314045 PIGBQ92521 554 aa16.02■□□□□ 0.15
DDX54-202ENST00000314045 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 PDE4BQ07343 736 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 QTRT2Q9H974 415 aaKnown RBP16.01■□□□□ 0.15
DDX54-202ENST00000314045 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
DDX54-202ENST00000314045 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 KIAA1210Q9ULL0 1709 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 STX6O43752 255 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 RAD50Q92878 1312 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 GSTO1P78417 241 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 FAM182BQ5T319 152 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
DDX54-202ENST00000314045 SCAND2PQ9GZW5 306 aaPredicted RBP16.01■□□□□ 0.15
DDX54-202ENST00000314045 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
DDX54-202ENST00000314045 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
DDX54-202ENST00000314045 MAGEB6Q8N7X4 407 aa16■□□□□ 0.15
DDX54-202ENST00000314045 EAF2Q96CJ1 260 aaPredicted RBP16■□□□□ 0.15
DDX54-202ENST00000314045 CCDC171Q6TFL3 1326 aa16■□□□□ 0.15
DDX54-202ENST00000314045 MAP3K15Q6ZN16 1313 aa16■□□□□ 0.15
DDX54-202ENST00000314045 TAF5LO75529 589 aa16■□□□□ 0.15
DDX54-202ENST00000314045 GIGYF2Q6Y7W6 1299 aaKnown RBP16■□□□□ 0.15
DDX54-202ENST00000314045 CCDC144CPQ8IYA2 1237 aa16■□□□□ 0.15
DDX54-202ENST00000314045 KLF18A0A0U1RQI7 1052 aa16■□□□□ 0.15
DDX54-202ENST00000314045 PCCAP05165 728 aaPredicted RBP16■□□□□ 0.15
DDX54-202ENST00000314045 MIGA1Q8NAN2 632 aa16■□□□□ 0.15
DDX54-202ENST00000314045 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
DDX54-202ENST00000314045 NDUFB9Q9Y6M9 179 aa16■□□□□ 0.15
DDX54-202ENST00000314045 IARSP41252 1262 aaKnown RBP15.99■□□□□ 0.15
DDX54-202ENST00000314045 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
DDX54-202ENST00000314045 CPS1P31327 1500 aa15.99■□□□□ 0.15
DDX54-202ENST00000314045 HEG1Q9ULI3 1381 aa15.99■□□□□ 0.15
DDX54-202ENST00000314045 F8W031 263 aaPredicted RBP15.99■□□□□ 0.15
DDX54-202ENST00000314045 CCDC192P0DO97 292 aa15.99■□□□□ 0.15
DDX54-202ENST00000314045 IL6STP40189 918 aaPredicted RBP15.99■□□□□ 0.15
DDX54-202ENST00000314045 CRKLP46109 303 aaKnown RBP15.99■□□□□ 0.15
DDX54-202ENST00000314045 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
DDX54-202ENST00000314045 PCMTD1Q96MG8 357 aaPredicted RBP15.99■□□□□ 0.15
DDX54-202ENST00000314045 FAM13BQ9NYF5 915 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 JAG2Q9Y219 1238 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 SGSM2O43147 1006 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 APBA3O96018 575 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 FAM227BQ96M60 508 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 TFIP11Q9UBB9 837 aaKnown RBP15.98■□□□□ 0.15
DDX54-202ENST00000314045 TMEM131LA2VDJ0 1609 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 METAP2P50579 478 aaKnown RBP eCLIP15.98■□□□□ 0.159e-7■■■□□ 16.7
DDX54-202ENST00000314045 LPIN2Q92539 896 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 OVOS2A0A0J9YW53 1432 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 OVOS2Q6IE36 1432 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 Q6ZUG5 572 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 TRIM5Q9C035 493 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 NUP62CLQ9H1M0 184 aa15.98■□□□□ 0.15
DDX54-202ENST00000314045 MAGEB6P1A0A0J9YX57 407 aa15.97■□□□□ 0.15
DDX54-202ENST00000314045 CTSWP56202 376 aa15.97■□□□□ 0.15
DDX54-202ENST00000314045 SSRP1Q08945 709 aaKnown RBP15.97■□□□□ 0.15
DDX54-202ENST00000314045 KRT23Q9C075 422 aa15.97■□□□□ 0.15
DDX54-202ENST00000314045 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
DDX54-202ENST00000314045 ESR2Q92731 530 aa15.97■□□□□ 0.15
DDX54-202ENST00000314045 CEP170BQ9Y4F5 1589 aaPredicted RBP15.97■□□□□ 0.15
DDX54-202ENST00000314045 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
DDX54-202ENST00000314045 WTAPQ15007 396 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 CCDC129Q6ZRS4 1044 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 COPRSQ9NQ92 184 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 STX8Q9UNK0 236 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 IQGAP1P46940 1657 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 MROH1Q8NDA8 1641 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 NBPF14Q5TI25 921 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 HELLSQ9NRZ9 838 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 IBTKQ9P2D0 1353 aaPredicted RBP15.96■□□□□ 0.15
DDX54-202ENST00000314045 RIMBP2O15034 1052 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 GSPT1P15170 499 aaKnown RBP15.96■□□□□ 0.15
DDX54-202ENST00000314045 ATP5JP18859 108 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 AK2P54819 239 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 EDC3Q96F86 508 aaKnown RBP15.96■□□□□ 0.15
DDX54-202ENST00000314045 STK32BQ9NY57 414 aa15.96■□□□□ 0.15
DDX54-202ENST00000314045 SEC63Q9UGP8 760 aaKnown RBP15.96■□□□□ 0.15
DDX54-202ENST00000314045 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.14
DDX54-202ENST00000314045 DCAF8L1A6NGE4 600 aa15.96■□□□□ 0.14
DDX54-202ENST00000314045 GNAT2P19087 354 aa15.96■□□□□ 0.14
DDX54-202ENST00000314045 HIBADHP31937 336 aaKnown RBP15.96■□□□□ 0.14
DDX54-202ENST00000314045 KCNQ4P56696 695 aa15.96■□□□□ 0.14
DDX54-202ENST00000314045 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.14
DDX54-202ENST00000314045 THRAP3Q9Y2W1 955 aaKnown RBP15.96■□□□□ 0.14
DDX54-202ENST00000314045 ZBTB43O43298 467 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 PRC1O43663 620 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 RPS8P62241 208 aaKnown RBP15.95■□□□□ 0.14
DDX54-202ENST00000314045 NCAPD2Q15021 1401 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 CHST3Q7LGC8 479 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 SIRT2Q8IXJ6 389 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
DDX54-202ENST00000314045 DENND2AQ9ULE3 1009 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 CPA1P15085 419 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 MYO3AQ8NEV4 1616 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 HLA-DOAP06340 250 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 CCDC96Q2M329 555 aa15.95■□□□□ 0.14
DDX54-202ENST00000314045 GLIPR1L2Q4G1C9 344 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms