RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 CCT2P78371 535 aaKnown RBP13.7□□□□□ -0.22
PTPN2-201ENST00000309660 KRT32Q14532 448 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 FAM184AQ8NB25 1140 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 ADORA1P30542 326 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 KRT85P78386 507 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 PIGBQ92521 554 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 PDCP20941 246 aa13.7□□□□□ -0.22
PTPN2-201ENST00000309660 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 TTLL5Q6EMB2 1281 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 PI16Q6UXB8 463 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 COL5A2P05997 1499 aaPredicted RBP13.69□□□□□ -0.22
PTPN2-201ENST00000309660 COL18A1P39060 1754 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 SOS2Q07890 1332 aaPredicted RBP13.69□□□□□ -0.22
PTPN2-201ENST00000309660 IFIT5Q13325 482 aaKnown RBP13.69□□□□□ -0.22
PTPN2-201ENST00000309660 TCIRG1Q13488 830 aa13.69□□□□□ -0.22
PTPN2-201ENST00000309660 STARD3NLO95772 234 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 APOBRQ0VD83 1088 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 TTC6Q86TZ1 520 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 ADAMTS7Q9UKP4 1686 aa13.68□□□□□ -0.22
PTPN2-201ENST00000309660 AFDNP55196 1824 aaKnown RBP13.68□□□□□ -0.22
PTPN2-201ENST00000309660 HLFQ16534 295 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 RAB11FIP4Q86YS3 637 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 NCOA5Q9HCD5 579 aaKnown RBP13.67□□□□□ -0.22
PTPN2-201ENST00000309660 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 LDHAL6AQ6ZMR3 332 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 CNNM1Q9NRU3 951 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 MRC1P22897 1456 aa13.67□□□□□ -0.22
PTPN2-201ENST00000309660 CKAP2LQ8IYA6 745 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 BICD2Q8TD16 824 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 MAST3O60307 1309 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
PTPN2-201ENST00000309660 SCARF1Q14162 830 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 USPL1Q5W0Q7 1092 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 GTF3C6Q969F1 213 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
PTPN2-201ENST00000309660 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
PTPN2-201ENST00000309660 RNF113AO15541 343 aaKnown RBP13.66□□□□□ -0.22
PTPN2-201ENST00000309660 NKX1-1Q15270 411 aaPredicted RBP13.66□□□□□ -0.22
PTPN2-201ENST00000309660 TRMT112Q9UI30 125 aaKnown RBP13.66□□□□□ -0.22
PTPN2-201ENST00000309660 M0R2C6 588 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 LIG1P18858 919 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 SCRN1Q12765 414 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 ZAP70P43403 619 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
PTPN2-201ENST00000309660 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 PDLIM2Q96JY6 352 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 ISCA1Q9BUE6 129 aa13.65□□□□□ -0.22
PTPN2-201ENST00000309660 DHX32Q7L7V1 743 aaKnown RBP13.65□□□□□ -0.23
PTPN2-201ENST00000309660 GREM2Q9H772 168 aa13.65□□□□□ -0.23
PTPN2-201ENST00000309660 GPHNQ9NQX3 736 aaPredicted RBP13.65□□□□□ -0.23
PTPN2-201ENST00000309660 ZBTB1Q9Y2K1 713 aa13.65□□□□□ -0.23
PTPN2-201ENST00000309660 ARFGEF2Q9Y6D5 1785 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 LMTK3Q96Q04 1460 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 ZMYM1Q5SVZ6 1142 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 E7EWF7 191 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 KDM4AO75164 1064 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 APPP05067 770 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 ITGA6P23229 1130 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
PTPN2-201ENST00000309660 IDH1O75874 414 aaKnown RBP13.63□□□□□ -0.23
PTPN2-201ENST00000309660 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 TSGA10IPQ3SY00 556 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 NUP62CLQ9H1M0 184 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 ADCY5O95622 1261 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 ACSBG1Q96GR2 724 aa13.63□□□□□ -0.23
PTPN2-201ENST00000309660 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 LETM1O95202 739 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 FTOQ9C0B1 505 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 GPR108Q9NPR9 543 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 NOL7Q9UMY1 257 aaKnown RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 EXOC5O00471 708 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 PCCAP05165 728 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 TEX13AQ9BXU3 409 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 TNMDQ9H2S6 317 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 GIGYF2Q6Y7W6 1299 aaKnown RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 LEO1Q8WVC0 666 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 SCAND2PQ9GZW5 306 aaPredicted RBP13.62□□□□□ -0.23
PTPN2-201ENST00000309660 ZKSCAN5Q9Y2L8 839 aa13.62□□□□□ -0.23
PTPN2-201ENST00000309660 MAP3K15Q6ZN16 1313 aa13.61□□□□□ -0.23
PTPN2-201ENST00000309660 SNAP23O00161 211 aa13.61□□□□□ -0.23
PTPN2-201ENST00000309660 CIAO1O76071 339 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms