RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 GNAT2P19087 354 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 KLHL10Q6JEL2 608 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 C2CD5Q86YS7 1000 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 PLEKHH1Q9ULM0 1364 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 HMGN5P82970 282 aaKnown RBP12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 ADGRL2O95490 1459 aa12.38□□□□□ -0.43
SYNPO2-201ENST00000307142 CCDC181Q5TID7 509 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 CALM1P0DP23 149 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 CALM2P0DP24 149 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 CALM3P0DP25 149 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 TXLNBQ8N3L3 684 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 MPNDQ8N594 471 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 METTL22Q9BUU2 404 aaPredicted RBP12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 CBFA2T2O43439 604 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 PDIA4P13667 645 aaKnown RBP12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 ATP8B2P98198 1209 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 ZNF397Q8NF99 534 aaPredicted RBP12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 NUP62CLQ9H1M0 184 aa12.37□□□□□ -0.43
SYNPO2-201ENST00000307142 PUM3Q15397 648 aaKnown RBP12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 CAMK4Q16566 473 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 HMG20BQ9P0W2 317 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 CCDC191Q8NCU4 936 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 SPDYE3A6NKU9 549 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 NAPAP54920 295 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 RTN1Q16799 776 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 TSPYL6Q8N831 410 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 TAF5LO75529 589 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 ARHGAP45Q92619 1136 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 KIAA0232Q92628 1395 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 ZBTB43O43298 467 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 TMTC2Q8N394 836 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 LIMCH1Q9UPQ0 1083 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 POLR3AO14802 1390 aaPredicted RBP12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 IL13P35225 146 aa12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 TNNT3P45378 269 aaPredicted RBP12.36□□□□□ -0.43
SYNPO2-201ENST00000307142 ERCC6L2Q5T890 1561 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 CDR1P51861 262 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 TCP10Q12799 353 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 PLCD3Q8N3E9 789 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 RRP36Q96EU6 259 aaKnown RBP12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 MAST3O60307 1309 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 ZYXQ15942 572 aaKnown RBP12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 HOOK2Q96ED9 719 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 AMPD3Q01432 767 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 SH2D4AQ9H788 454 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 STXBP4Q6ZWJ1 553 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 ZNF594Q96JF6 807 aaPredicted RBP12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 GNAQP50148 359 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 TTC22Q5TAA0 569 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 ARHGEF10LQ9HCE6 1279 aa12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 ORC3Q9UBD5 711 aaPredicted RBP12.35□□□□□ -0.43
SYNPO2-201ENST00000307142 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 NCBP1Q09161 790 aaKnown RBP12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 CCP110O43303 1012 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 TESK2Q96S53 571 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 SP4Q02446 784 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
SYNPO2-201ENST00000307142 FKBP15Q5T1M5 1219 aa12.33□□□□□ -0.43
SYNPO2-201ENST00000307142 UNC5CLQ8IV45 518 aa12.33□□□□□ -0.43
SYNPO2-201ENST00000307142 CNNM3Q8NE01 707 aa12.33□□□□□ -0.43
SYNPO2-201ENST00000307142 IVNS1ABPQ9Y6Y0 642 aa12.33□□□□□ -0.43
SYNPO2-201ENST00000307142 RNF113AO15541 343 aaKnown RBP12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 ZBTB21Q9ULJ3 1066 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 KIF20AO95235 890 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 IDEP14735 1019 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 ERLIN2O94905 339 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 WDR66Q8TBY9 1149 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 UBA7P41226 1012 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 CCDC148Q8NFR7 591 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
SYNPO2-201ENST00000307142 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 NEFHP12036 1026 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 PUF60Q9UHX1 559 aaKnown RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 GJB2P29033 226 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 PHKG2P15735 406 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 AATFQ9NY61 560 aaKnown RBP eCLIP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 METP08581 1390 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 NOD1Q9Y239 953 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 MLH3Q9UHC1 1453 aa12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 ENOX2Q16206 610 aaKnown RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 FAM177A1Q8N128 213 aaPredicted RBP12.32□□□□□ -0.44
SYNPO2-201ENST00000307142 PLEKHG3A1L390 1219 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms