RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 GJB4Q9NTQ9 266 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 FAM135BQ49AJ0 1406 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 METAP2P50579 478 aaKnown RBP eCLIP15.43■□□□□ 0.06
CASC4-201ENST00000299957 DHX32Q7L7V1 743 aaKnown RBP15.43■□□□□ 0.06
CASC4-201ENST00000299957 IARSP41252 1262 aaKnown RBP15.43■□□□□ 0.06
CASC4-201ENST00000299957 CUL4AQ13619 759 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 HSP90B2PQ58FF3 399 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 TNNI3KQ59H18 835 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 TMCO3Q6UWJ1 677 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 FPGT-TNNI3KV9GXZ4 949 aa15.43■□□□□ 0.06
CASC4-201ENST00000299957 hCG_1642624A0A1W2PR95 340 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 KARSQ15046 597 aaKnown RBP15.42■□□□□ 0.06
CASC4-201ENST00000299957 PHKBQ93100 1093 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 USP28Q96RU2 1077 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 GPHNQ9NQX3 736 aaPredicted RBP15.42■□□□□ 0.06
CASC4-201ENST00000299957 JAG2Q9Y219 1238 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 SLC12A7Q9Y666 1083 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 ROBO2Q9HCK4 1378 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 SPTLC2O15270 562 aa15.42■□□□□ 0.06
CASC4-201ENST00000299957 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
CASC4-201ENST00000299957 ZSCAN16Q9H4T2 348 aaPredicted RBP15.42■□□□□ 0.06
CASC4-201ENST00000299957 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
CASC4-201ENST00000299957 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 OSBPL3Q9H4L5 887 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 SBNO1A3KN83 1393 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 SMTNL1A8MU46 457 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 HMGB1P09429 215 aaKnown RBP15.41■□□□□ 0.06
CASC4-201ENST00000299957 ZNF75DP51815 510 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 GPS2Q13227 327 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 ENOX2Q16206 610 aaKnown RBP15.41■□□□□ 0.06
CASC4-201ENST00000299957 CCDC102AQ96A19 550 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 ELF2Q15723 593 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 ARHGAP29Q52LW3 1261 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
CASC4-201ENST00000299957 PI4K2BQ8TCG2 481 aa15.41■□□□□ 0.06
CASC4-201ENST00000299957 A0A1B0GUL7 405 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 GCKRQ14397 625 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 UTP14AQ9BVJ6 771 aaKnown RBP15.4■□□□□ 0.06
CASC4-201ENST00000299957 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 MYOM2P54296 1465 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 PLEKHG3A1L390 1219 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 XBP1P17861 261 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 ATP2B2Q01814 1243 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 GOLGA8FQ08AF8 430 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 GOLGA8DPQ0D2H9 430 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 FILIP1LQ4L180 1135 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 NACAP1Q9BZK3 213 aa15.4■□□□□ 0.06
CASC4-201ENST00000299957 NUTM2BA6NNL0 878 aaPredicted RBP15.39■□□□□ 0.05
CASC4-201ENST00000299957 NUTM2EB1AL46 878 aaPredicted RBP15.39■□□□□ 0.05
CASC4-201ENST00000299957 CTAGE5O15320 804 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 NUTM2AQ8IVF1 878 aaPredicted RBP15.39■□□□□ 0.05
CASC4-201ENST00000299957 NCOA7Q8NI08 942 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 TMOD3Q9NYL9 352 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 STAMQ92783 540 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 STAP2Q9UGK3 403 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 TAF6LQ9Y6J9 622 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 IQGAP3Q86VI3 1631 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 DBNLQ9UJU6 430 aaKnown RBP15.39■□□□□ 0.05
CASC4-201ENST00000299957 ZFYVE16Q7Z3T8 1539 aa15.39■□□□□ 0.05
CASC4-201ENST00000299957 B4E1Z4 1266 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 AXDND1Q5T1B0 1012 aaPredicted RBP15.38■□□□□ 0.05
CASC4-201ENST00000299957 PI16Q6UXB8 463 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 CLSTN2Q9H4D0 955 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 ZHX3Q9H4I2 956 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 LZTFL1Q9NQ48 299 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 PHACTR2O75167 634 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 SASH1O94885 1247 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 MCM6Q14566 821 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 ZSCAN25Q6NSZ9 544 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 BRMS1Q9HCU9 246 aa15.38■□□□□ 0.05
CASC4-201ENST00000299957 PTCH1Q13635 1447 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 CDKL5O76039 1030 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 SSBP05455 408 aaKnown RBP eCLIP15.37■□□□□ 0.05
CASC4-201ENST00000299957 PPARDQ03181 441 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 G3V3G9 751 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 CYP21A2P08686 494 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 DCAF8Q5TAQ9 597 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 CCDC12Q8WUD4 166 aaPredicted RBP15.37■□□□□ 0.05
CASC4-201ENST00000299957 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 CCDC102BQ68D86 513 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
CASC4-201ENST00000299957 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 ZNF215Q9UL58 517 aaPredicted RBP15.37■□□□□ 0.05
CASC4-201ENST00000299957 AKAP2Q9Y2D5 859 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 RGS12O14924 1447 aa15.37■□□□□ 0.05
CASC4-201ENST00000299957 PATL2C9JE40 543 aaKnown RBP15.36■□□□□ 0.05
CASC4-201ENST00000299957 EPB41L2O43491 1005 aaKnown RBP15.36■□□□□ 0.05
CASC4-201ENST00000299957 MAP3K4Q9Y6R4 1608 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 CBFA2T2O43439 604 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 PLIN2Q99541 437 aa15.36■□□□□ 0.05
CASC4-201ENST00000299957 PUS3Q9BZE2 481 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms