RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 C5P01031 1676 aa28.83■■■□□ 2.21
SPTSSA-201ENST00000298130 KIAA1524Q8TCG1 905 aa28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 BCL11BQ9C0K0 894 aaPredicted RBP28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 ELP1O95163 1332 aa28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 TTLL7Q6ZT98 887 aa28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 ERCC4Q92889 916 aaPredicted RBP28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 FBXW7Q969H0 707 aa28.82■■■□□ 2.2
SPTSSA-201ENST00000298130 RESTQ13127 1097 aa28.81■■■□□ 2.2
SPTSSA-201ENST00000298130 CCDC186Q7Z3E2 898 aa28.81■■■□□ 2.2
SPTSSA-201ENST00000298130 OVOS2A0A0G2JMS6 1433 aa28.81■■■□□ 2.2
SPTSSA-201ENST00000298130 CABP4P57796 275 aa28.81■■■□□ 2.2
SPTSSA-201ENST00000298130 CCDC85AQ96PX6 553 aaPredicted RBP28.81■■■□□ 2.2
SPTSSA-201ENST00000298130 TSGA10IPQ3SY00 556 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 FMNL2Q96PY5 1086 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 HAUS7Q99871 368 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 TRIM5Q9C035 493 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 TAOK2Q9UL54 1235 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 SLIT3O75094 1523 aa28.8■■■□□ 2.2
SPTSSA-201ENST00000298130 LRRC24Q50LG9 513 aa28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 ZBTB3Q9H5J0 574 aa28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 KRT32Q14532 448 aa28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 CLSTN2Q9H4D0 955 aa28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 SPTLC3Q9NUV7 552 aa28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 U3KPZ7 1027 aaPredicted RBP28.79■■■□□ 2.2
SPTSSA-201ENST00000298130 NBPF26B4DH59 902 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 RABL6Q3YEC7 729 aaPredicted RBP28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 NBPF14Q5TI25 921 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 TTLL5Q6EMB2 1281 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 NBPF10Q6P3W6 841 aaKnown RBP28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 ZNF710Q8N1W2 664 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 NBPF15Q8N660 670 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 JCADQ9P266 1359 aa28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 GPHNQ9NQX3 736 aaPredicted RBP28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 ZNF330Q9Y3S2 320 aaPredicted RBP28.78■■■□□ 2.2
SPTSSA-201ENST00000298130 A1BGP04217 495 aa28.77■■■□□ 2.2
SPTSSA-201ENST00000298130 ZNF165P49910 485 aa28.77■■■□□ 2.2
SPTSSA-201ENST00000298130 RAB11FIP4Q86YS3 637 aa28.77■■■□□ 2.2
SPTSSA-201ENST00000298130 KBTBD3Q8NAB2 608 aa28.77■■■□□ 2.2
SPTSSA-201ENST00000298130 ALDH8A1Q9H2A2 487 aaPredicted RBP28.77■■■□□ 2.2
SPTSSA-201ENST00000298130 CTDNEP1O95476 244 aa28.76■■■□□ 2.19
SPTSSA-201ENST00000298130 CASP7P55210 303 aa28.76■■■□□ 2.19
SPTSSA-201ENST00000298130 HSP90AB3PQ58FF7 597 aa28.76■■■□□ 2.19
SPTSSA-201ENST00000298130 PUS3Q9BZE2 481 aaKnown RBP28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 PAG1Q9NWQ8 432 aa28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 SIPA1L3O60292 1781 aaPredicted RBP28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 FOXO4P98177 505 aa28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 ATG9AQ7Z3C6 839 aa28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 DDX19AQ9NUU7 478 aaKnown RBP28.75■■■□□ 2.19
SPTSSA-201ENST00000298130 DCAF5Q96JK2 942 aa28.74■■■□□ 2.19
SPTSSA-201ENST00000298130 PHRF1Q9P1Y6 1649 aaKnown RBP28.74■■■□□ 2.19
SPTSSA-201ENST00000298130 PTPDC1A2A3K4 754 aa28.74■■■□□ 2.19
SPTSSA-201ENST00000298130 NSUN7Q8NE18 718 aaKnown RBP28.74■■■□□ 2.19
SPTSSA-201ENST00000298130 OTUD7BQ6GQQ9 843 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 HAND2P61296 217 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 GOLGA6L6A8MZA4 724 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 PLBD2Q8NHP8 589 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 PRIMPOLQ96LW4 560 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 GOLPH3LQ9H4A5 285 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 PRDM10Q9NQV6 1147 aa28.73■■■□□ 2.19
SPTSSA-201ENST00000298130 RIOK3O14730 519 aaKnown RBP28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 C11orf57Q6ZUT1 292 aaPredicted RBP28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 C1orf167Q5SNV9 1468 aa28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 FKBP4Q02790 459 aaKnown RBP eCLIP28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 DHX32Q7L7V1 743 aaKnown RBP28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 USP28Q96RU2 1077 aa28.72■■■□□ 2.19
SPTSSA-201ENST00000298130 C16orf45Q96MC5 204 aaPredicted RBP28.71■■■□□ 2.19
SPTSSA-201ENST00000298130 ADD1P35611 737 aaKnown RBP28.71■■■□□ 2.19
SPTSSA-201ENST00000298130 ARID5BQ14865 1188 aa28.71■■■□□ 2.19
SPTSSA-201ENST00000298130 CCAR1Q8IX12 1150 aaKnown RBP28.71■■■□□ 2.19
SPTSSA-201ENST00000298130 HSPD1P10809 573 aaKnown RBP28.7■■■□□ 2.19
SPTSSA-201ENST00000298130 ZNF75DP51815 510 aa28.7■■■□□ 2.19
SPTSSA-201ENST00000298130 KIF3AQ9Y496 699 aa28.7■■■□□ 2.19
SPTSSA-201ENST00000298130 MRC1P22897 1456 aa28.7■■■□□ 2.18
SPTSSA-201ENST00000298130 E7EWF7 191 aa28.7■■■□□ 2.18
SPTSSA-201ENST00000298130 CCDC144BQ3MJ40 725 aa28.7■■■□□ 2.18
SPTSSA-201ENST00000298130 CCDC144CPQ8IYA2 1237 aa28.7■■■□□ 2.18
SPTSSA-201ENST00000298130 MAP7D2Q96T17 732 aa28.7■■■□□ 2.18
SPTSSA-201ENST00000298130 C19orf44Q9H6X5 657 aa28.69■■■□□ 2.18
SPTSSA-201ENST00000298130 PFKFB2O60825 505 aa28.69■■■□□ 2.18
SPTSSA-201ENST00000298130 HMGN5P82970 282 aaKnown RBP28.69■■■□□ 2.18
SPTSSA-201ENST00000298130 BCL2L12Q9HB09 334 aa28.69■■■□□ 2.18
SPTSSA-201ENST00000298130 M0R2C6 588 aa28.68■■■□□ 2.18
SPTSSA-201ENST00000298130 IFIT1P09914 478 aaKnown RBP28.68■■■□□ 2.18
SPTSSA-201ENST00000298130 SMARCC2Q8TAQ2 1214 aa28.68■■■□□ 2.18
SPTSSA-201ENST00000298130 GJB4Q9NTQ9 266 aa28.68■■■□□ 2.18
SPTSSA-201ENST00000298130 MAST3O60307 1309 aa28.67■■■□□ 2.18
SPTSSA-201ENST00000298130 A0A1B0GUL7 405 aa28.67■■■□□ 2.18
SPTSSA-201ENST00000298130 RBM43Q6ZSC3 357 aaKnown RBP28.67■■■□□ 2.18
SPTSSA-201ENST00000298130 CLIP2Q9UDT6 1046 aa28.67■■■□□ 2.18
SPTSSA-201ENST00000298130 CFAP45Q9UL16 551 aa28.67■■■□□ 2.18
SPTSSA-201ENST00000298130 H7C1W4 665 aa28.66■■■□□ 2.18
SPTSSA-201ENST00000298130 CWC25Q9NXE8 425 aaPredicted RBP28.66■■■□□ 2.18
SPTSSA-201ENST00000298130 PDIA4P13667 645 aaKnown RBP28.66■■■□□ 2.18
SPTSSA-201ENST00000298130 ATF3P18847 181 aa28.66■■■□□ 2.18
SPTSSA-201ENST00000298130 PLA2G4DQ86XP0 818 aa28.66■■■□□ 2.18
SPTSSA-201ENST00000298130 ADORA1P30542 326 aa28.65■■■□□ 2.18
SPTSSA-201ENST00000298130 ME1P48163 572 aa28.65■■■□□ 2.18
SPTSSA-201ENST00000298130 ZSCAN25Q6NSZ9 544 aa28.65■■■□□ 2.18
SPTSSA-201ENST00000298130 TDRD7Q8NHU6 1098 aaKnown RBP28.65■■■□□ 2.18
SPTSSA-201ENST00000298130 CACTINQ8WUQ7 758 aaKnown RBP28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms