RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 NLRP5P59047 1200 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 LRSAM1Q6UWE0 723 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 E9PCH4 1651 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 FERP16591 822 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 DAAM2Q86T65 1068 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
PKNOX1-201ENST00000291547 ZNF213O14771 459 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 MXRA7P84157 204 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 DUSP27Q5VZP5 1158 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 NSRP1Q9H0G5 558 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 PRDM4Q9UKN5 801 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 IFIT3O14879 490 aaKnown RBP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 POLR3DP05423 398 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 CCDC8Q9H0W5 538 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 V9GYY5 206 aaPredicted RBP12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 PIK3C2GO75747 1445 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 ACTN2P35609 894 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 UBASH3AP57075 661 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 MIS18AQ9NYP9 233 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 EMILIN1Q9Y6C2 1016 aa12.28□□□□□ -0.44
PKNOX1-201ENST00000291547 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 EBAG9O00559 213 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 PRC1O43663 620 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 UBA7P41226 1012 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 PPP4R3AQ6IN85 833 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 TOM1L2Q6ZVM7 507 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 FAM114A1Q8IWE2 563 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 SCLT1Q96NL6 688 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 USP16Q9Y5T5 823 aa12.27□□□□□ -0.44
PKNOX1-201ENST00000291547 PAIP2Q9BPZ3 127 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 TTC21BQ7Z4L5 1316 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 SLU7O95391 586 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 AMPD3Q01432 767 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 MAP3K4Q9Y6R4 1608 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 IGSF3O75054 1194 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 GRIPAP1Q4V328 841 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 CFAP57Q96MR6 1250 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 C19orf44Q9H6X5 657 aa12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
PKNOX1-201ENST00000291547 TTC21AQ8NDW8 1320 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 AGLP35573 1532 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 OPA1O60313 960 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 OTUD6BQ8N6M0 293 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 IARSP41252 1262 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 IFI16Q16666 785 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 CCDC121Q6ZUS5 278 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 CEP83Q9Y592 693 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 PPFIA3O75145 1194 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 PSMD1Q99460 953 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 TTC12Q9H892 705 aaPredicted RBP12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 PARD3Q8TEW0 1356 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 KIF4AO95239 1232 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 TRIM47Q96LD4 638 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 TSNARE1Q96NA8 513 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 CARD14Q9BXL6 1004 aa12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 IQCGQ9H095 443 aaKnown RBP12.26□□□□□ -0.45
PKNOX1-201ENST00000291547 A0A1W2PP64 1363 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 PPRC1Q5VV67 1664 aaKnown RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 CYLC1P35663 651 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 PIP4K2BP78356 416 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 PPP1R1BQ9UD71 204 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 MAP3K12Q12852 859 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 FAM200AQ8TCP9 573 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 SPAG5Q96R06 1193 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 RNF41Q9H4P4 317 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 A0A1B0GUL7 405 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 GOLIM4O00461 696 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 ZBTB16Q05516 673 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 ALDH1L2Q3SY69 923 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 HSP90AA4PQ58FG1 418 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 CRACR2BQ8N4Y2 399 aaPredicted RBP12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 ANKS4BQ8N8V4 417 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 BANK1Q8NDB2 785 aa12.25□□□□□ -0.45
PKNOX1-201ENST00000291547 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 ANO6Q4KMQ2 910 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 PHACTR2O75167 634 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 BMP2KLQ5H9B9 411 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 MCM10Q7L590 875 aa12.24□□□□□ -0.45
PKNOX1-201ENST00000291547 C10orf67Q8IYJ2 551 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms