RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 CYP4F22Q6NT55 531 aa18.02■□□□□ 0.48
TPM1-202ENST00000288398 TRPM4Q8TD43 1214 aa18.02■□□□□ 0.48
TPM1-202ENST00000288398 TSR2Q969E8 191 aaKnown RBP18.02■□□□□ 0.48
TPM1-202ENST00000288398 GPR101Q96P66 508 aaPredicted RBP18.02■□□□□ 0.48
TPM1-202ENST00000288398 CCDC85AQ96PX6 553 aaPredicted RBP18.02■□□□□ 0.48
TPM1-202ENST00000288398 SEC31BQ9NQW1 1179 aa18.02■□□□□ 0.48
TPM1-202ENST00000288398 ZBTB12Q9Y330 459 aaPredicted RBP18.02■□□□□ 0.48
TPM1-202ENST00000288398 ZEB1P37275 1124 aaPredicted RBP18.01■□□□□ 0.47
TPM1-202ENST00000288398 LBX1P52954 281 aa18.01■□□□□ 0.47
TPM1-202ENST00000288398 CST9Q5W186 159 aa18.01■□□□□ 0.47
TPM1-202ENST00000288398 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
TPM1-202ENST00000288398 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
TPM1-202ENST00000288398 PI4KAP2A4QPH2 592 aa18■□□□□ 0.47
TPM1-202ENST00000288398 ANP32CO43423 234 aa18■□□□□ 0.47
TPM1-202ENST00000288398 CCDC27Q2M243 656 aa18■□□□□ 0.47
TPM1-202ENST00000288398 TWISTNBQ3B726 338 aaPredicted RBP18■□□□□ 0.47
TPM1-202ENST00000288398 TBC1D10BQ4KMP7 808 aaPredicted RBP18■□□□□ 0.47
TPM1-202ENST00000288398 RBM26Q5T8P6 1007 aaKnown RBP18■□□□□ 0.47
TPM1-202ENST00000288398 TSPYL6Q8N831 410 aa18■□□□□ 0.47
TPM1-202ENST00000288398 PI4KAP1Q8N8J0 262 aa18■□□□□ 0.47
TPM1-202ENST00000288398 JARID2Q92833 1246 aaPredicted RBP18■□□□□ 0.47
TPM1-202ENST00000288398 DCPSQ96C86 337 aaKnown RBP18■□□□□ 0.47
TPM1-202ENST00000288398 MRS2Q9HD23 443 aa18■□□□□ 0.47
TPM1-202ENST00000288398 PODXL2Q9NZ53 605 aa18■□□□□ 0.47
TPM1-202ENST00000288398 PGAP2Q9UHJ9 254 aa18■□□□□ 0.47
TPM1-202ENST00000288398 TRPM7Q96QT4 1865 aa18■□□□□ 0.47
TPM1-202ENST00000288398 SAMD7Q7Z3H4 446 aa17.99■□□□□ 0.47
TPM1-202ENST00000288398 XDHP47989 1333 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 MAP2K2P36507 400 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 HIRAP54198 1017 aaPredicted RBP17.98■□□□□ 0.47
TPM1-202ENST00000288398 CTSWP56202 376 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 KRT26Q7Z3Y9 468 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 SAPCD2Q86UD0 394 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 USP48Q86UV5 1035 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
TPM1-202ENST00000288398 SHTN1A0MZ66 631 aa17.97■□□□□ 0.47
TPM1-202ENST00000288398 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
TPM1-202ENST00000288398 HSPA8P11142 646 aaKnown RBP17.97■□□□□ 0.47
TPM1-202ENST00000288398 ATP2B4P23634 1241 aa17.97■□□□□ 0.47
TPM1-202ENST00000288398 HHIPL1Q96JK4 782 aa17.97■□□□□ 0.47
TPM1-202ENST00000288398 IL16Q14005 1332 aa17.97■□□□□ 0.47
TPM1-202ENST00000288398 KIF4BQ2VIQ3 1234 aa17.96■□□□□ 0.47
TPM1-202ENST00000288398 SULF1Q8IWU6 871 aa17.96■□□□□ 0.47
TPM1-202ENST00000288398 AOC2O75106 756 aa17.95■□□□□ 0.46
TPM1-202ENST00000288398 CCDC184Q52MB2 194 aa17.95■□□□□ 0.46
TPM1-202ENST00000288398 C2orf69Q8N8R5 385 aa17.95■□□□□ 0.46
TPM1-202ENST00000288398 MYH16Q9H6N6 1097 aa17.95■□□□□ 0.46
TPM1-202ENST00000288398 KCNQ5Q9NR82 932 aa17.95■□□□□ 0.46
TPM1-202ENST00000288398 RTL9Q8NET4 1388 aa17.94■□□□□ 0.46
TPM1-202ENST00000288398 CA12O43570 354 aa17.94■□□□□ 0.46
TPM1-202ENST00000288398 IGKV5-2P06315 115 aa17.94■□□□□ 0.46
TPM1-202ENST00000288398 VIL1P09327 827 aaKnown RBP17.94■□□□□ 0.46
TPM1-202ENST00000288398 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
TPM1-202ENST00000288398 HUNKP57058 714 aa17.94■□□□□ 0.46
TPM1-202ENST00000288398 FKBP5Q13451 457 aaPredicted RBP17.94■□□□□ 0.46
TPM1-202ENST00000288398 CWF19L2Q2TBE0 894 aaKnown RBP17.94■□□□□ 0.46
TPM1-202ENST00000288398 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
TPM1-202ENST00000288398 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
TPM1-202ENST00000288398 COL4A1P02462 1669 aa17.93■□□□□ 0.46
TPM1-202ENST00000288398 NEURL1BA8MQ27 555 aa17.93■□□□□ 0.46
TPM1-202ENST00000288398 FLIIQ13045 1269 aa17.93■□□□□ 0.46
TPM1-202ENST00000288398 NCBP3Q53F19 620 aaKnown RBP17.93■□□□□ 0.46
TPM1-202ENST00000288398 RSBN1LQ6PCB5 846 aaPredicted RBP17.93■□□□□ 0.46
TPM1-202ENST00000288398 AGBL3Q8NEM8 1001 aa17.93■□□□□ 0.46
TPM1-202ENST00000288398 BSDC1Q9NW68 430 aaPredicted RBP17.93■□□□□ 0.46
TPM1-202ENST00000288398 THSD7BQ9C0I4 1608 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 USP17L3A6NCW0 530 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 USP17L4A6NCW7 530 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 NOGQ13253 232 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 USP17L1Q7RTZ2 530 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 PODNQ7Z5L7 613 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 TTLL11Q8NHH1 800 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 FBXW7Q969H0 707 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 GREM2Q9H772 168 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 GBA2Q9HCG7 927 aaPredicted RBP17.92■□□□□ 0.46
TPM1-202ENST00000288398 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
TPM1-202ENST00000288398 ADM5C9JUS6 153 aa17.91■□□□□ 0.46
TPM1-202ENST00000288398 BRPF1P55201 1214 aaPredicted RBP17.91■□□□□ 0.46
TPM1-202ENST00000288398 G2E3Q7L622 706 aa17.91■□□□□ 0.46
TPM1-202ENST00000288398 MPHOSPH8Q99549 860 aa17.91■□□□□ 0.46
TPM1-202ENST00000288398 FANCIQ9NVI1 1328 aa17.91■□□□□ 0.46
TPM1-202ENST00000288398 EGFRP00533 1210 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 USP17L8P0C7I0 530 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 KCNJ4P48050 445 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 WDR63Q8IWG1 891 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 DNAAF4Q8WXU2 420 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 MINPP1Q9UNW1 487 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 MED23Q9ULK4 1368 aa17.9■□□□□ 0.46
TPM1-202ENST00000288398 ZNF316A6NFI3 1004 aaPredicted RBP17.89■□□□□ 0.45
TPM1-202ENST00000288398 H7C1W4 665 aa17.89■□□□□ 0.45
TPM1-202ENST00000288398 CCT4P50991 539 aaKnown RBP17.89■□□□□ 0.45
TPM1-202ENST00000288398 GCKRQ14397 625 aa17.89■□□□□ 0.45
TPM1-202ENST00000288398 OGFOD1Q8N543 542 aa17.89■□□□□ 0.45
TPM1-202ENST00000288398 CCDC102AQ96A19 550 aa17.89■□□□□ 0.45
TPM1-202ENST00000288398 ANKRD2Q9GZV1 360 aa17.89■□□□□ 0.45
TPM1-202ENST00000288398 ITGA6P23229 1130 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 ZNF157P51786 506 aaPredicted RBP17.88■□□□□ 0.45
TPM1-202ENST00000288398 ZNF280AP59817 542 aaPredicted RBP17.88■□□□□ 0.45
TPM1-202ENST00000288398 SCARF1Q14162 830 aa17.88■□□□□ 0.45
TPM1-202ENST00000288398 ANGEL2Q5VTE6 544 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms