RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ZSCAN25Q6NSZ9 544 aa15.61■□□□□ 0.09
SLC28A1-201ENST00000286749 DBNDD2Q9BQY9 259 aa15.61■□□□□ 0.09
SLC28A1-201ENST00000286749 SCRN1Q12765 414 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 DDX46Q7L014 1031 aaKnown RBP15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 UBE3BQ7Z3V4 1068 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 C16orf45Q96MC5 204 aaPredicted RBP15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 FGD1P98174 961 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 MCMDC2Q4G0Z9 681 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 NFATC2IPQ8NCF5 419 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 ZSCAN16Q9H4T2 348 aaPredicted RBP15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 SLC52A2Q9HAB3 445 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 CFAP45Q9UL16 551 aa15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 CCDC9Q9Y3X0 531 aaKnown RBP15.6■□□□□ 0.09
SLC28A1-201ENST00000286749 KDM6AO15550 1401 aaPredicted RBP15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 ANKRD13DQ6ZTN6 518 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 STOX1Q6ZVD7 989 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 PDCL2Q8N4E4 241 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 CLIP2Q9UDT6 1046 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 RFX7Q2KHR2 1363 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 CBX1P83916 185 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 ATP2B3Q16720 1220 aa15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
SLC28A1-201ENST00000286749 CTIFO43310 598 aaKnown RBP15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 CCDC144BQ3MJ40 725 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 CCDC144CPQ8IYA2 1237 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 HAUS7Q99871 368 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 FTOQ9C0B1 505 aaKnown RBP eCLIP15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 ARFGEF2Q9Y6D5 1785 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 LMTK3Q96Q04 1460 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 C11orf57Q6ZUT1 292 aaPredicted RBP15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 CACTINQ8WUQ7 758 aaKnown RBP15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 ANKRD7Q92527 254 aa15.58■□□□□ 0.08
SLC28A1-201ENST00000286749 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 PTCD1O75127 700 aaKnown RBP15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 ADD1P35611 737 aaKnown RBP15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 ANKLE2Q86XL3 938 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 USP16Q9Y5T5 823 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 ERBB3P21860 1342 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 PFKFB2O60825 505 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 SLFNL1Q499Z3 407 aa15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 CCAR1Q8IX12 1150 aaKnown RBP15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 NSUN7Q8NE18 718 aaKnown RBP15.57■□□□□ 0.08
SLC28A1-201ENST00000286749 TRPM3Q9HCF6 1732 aaPredicted RBP15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 GOLGA6L19H0YKK7 550 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 APOBRQ0VD83 1088 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 IQCB1Q15051 598 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 RABL6Q3YEC7 729 aaPredicted RBP15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 LRP10Q7Z4F1 713 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 RAPGEF4Q8WZA2 1011 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 GOLPH3LQ9H4A5 285 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 PTPDC1A2A3K4 754 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 CTDNEP1O95476 244 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 CAVIN2O95810 425 aa15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 LLPHQ9BRT6 129 aaKnown RBP15.56■□□□□ 0.08
SLC28A1-201ENST00000286749 A0A087WZG4 1122 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 TNNT1P13805 278 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 ZC3H6P61129 1189 aaKnown RBP15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 NAA16Q6N069 864 aaPredicted RBP15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 DHX32Q7L7V1 743 aaKnown RBP15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 KBTBD3Q8NAB2 608 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 SH3TC1Q8TE82 1336 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 PPFIA3O75145 1194 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 PHKG2P15735 406 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 CDC25BP30305 580 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 CCT2P78371 535 aaKnown RBP15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 NLRP2Q9NX02 1062 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 RCOR1Q9UKL0 485 aa15.55■□□□□ 0.08
SLC28A1-201ENST00000286749 A0A087WWV3 80 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 SPDYE4A6NLX3 237 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 STX1AQ16623 288 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 TPD52L1Q16890 204 aaPredicted RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 A0A0G2JLW4 131 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 GOLIM4O00461 696 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 HMGB1P09429 215 aaKnown RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 SNRPA1P09661 255 aaKnown RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 ZSCAN20P17040 1043 aaPredicted RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 NCBP1Q09161 790 aaKnown RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 USP28Q96RU2 1077 aa15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 NCOA5Q9HCD5 579 aaKnown RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
SLC28A1-201ENST00000286749 U2AF2P26368 475 aaKnown RBP eCLIP15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 ARID5BQ14865 1188 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 SARM1Q6SZW1 724 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 LMBR1LQ6UX01 489 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 CCDC73Q6ZRK6 1079 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 NEUROD6Q96NK8 337 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 CTAGE5O15320 804 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 GUCY1B3Q02153 619 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 SNW1Q13573 536 aaKnown RBP15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 KRT28Q7Z3Y7 464 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 PAG1Q9NWQ8 432 aa15.53■□□□□ 0.08
SLC28A1-201ENST00000286749 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
SLC28A1-201ENST00000286749 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
SLC28A1-201ENST00000286749 DMTNQ08495 405 aa15.52■□□□□ 0.08
SLC28A1-201ENST00000286749 MEGF6O75095 1541 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms