RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 TM4SF1P30408 202 aa25.41■■□□□ 1.66
YBX3-202ENST00000279550 ABCC12Q96J65 1359 aa25.41■■□□□ 1.66
YBX3-202ENST00000279550 SLC10A5Q5PT55 438 aa25.4■■□□□ 1.66
YBX3-202ENST00000279550 EVI5LQ96CN4 794 aa25.4■■□□□ 1.66
YBX3-202ENST00000279550 ZNF594Q96JF6 807 aaPredicted RBP25.4■■□□□ 1.66
YBX3-202ENST00000279550 CWC27Q6UX04 472 aaKnown RBP25.4■■□□□ 1.66
YBX3-202ENST00000279550 BOLA2Q9H3K6 86 aa25.4■■□□□ 1.66
YBX3-202ENST00000279550 CCDC152Q4G0S7 254 aa25.39■■□□□ 1.65
YBX3-202ENST00000279550 LSG1Q9H089 658 aaKnown RBP25.39■■□□□ 1.65
YBX3-202ENST00000279550 FOXD4L1Q9NU39 408 aa25.39■■□□□ 1.65
YBX3-202ENST00000279550 ANKRD18BA2A2Z9 1011 aa25.38■■□□□ 1.65
YBX3-202ENST00000279550 NPHP1O15259 732 aa25.38■■□□□ 1.65
YBX3-202ENST00000279550 NLGN1Q8N2Q7 840 aa25.38■■□□□ 1.65
YBX3-202ENST00000279550 DIAPH3Q9NSV4 1193 aa25.38■■□□□ 1.65
YBX3-202ENST00000279550 MCCP23508 829 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 LRRC24Q50LG9 513 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 TAF7LQ5H9L4 462 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 CNBD1Q8NA66 436 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 DBNDD2Q9BQY9 259 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 CIAO1O76071 339 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 IL17RAQ96F46 866 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 FBXO3Q9UK99 471 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 RTL9Q8NET4 1388 aa25.37■■□□□ 1.65
YBX3-202ENST00000279550 RAD50Q92878 1312 aa25.36■■□□□ 1.65
YBX3-202ENST00000279550 EYA2O00167 538 aa25.36■■□□□ 1.65
YBX3-202ENST00000279550 EPB41L2O43491 1005 aaKnown RBP25.36■■□□□ 1.65
YBX3-202ENST00000279550 C3orf67Q6ZVT6 689 aa25.36■■□□□ 1.65
YBX3-202ENST00000279550 PUS3Q9BZE2 481 aaKnown RBP25.36■■□□□ 1.65
YBX3-202ENST00000279550 QSER1Q2KHR3 1735 aa25.35■■□□□ 1.65
YBX3-202ENST00000279550 POLRMTO00411 1230 aaKnown RBP25.35■■□□□ 1.65
YBX3-202ENST00000279550 SERPINB2P05120 415 aa25.35■■□□□ 1.65
YBX3-202ENST00000279550 ATP5JP18859 108 aa25.35■■□□□ 1.65
YBX3-202ENST00000279550 IL15P40933 162 aaPredicted RBP25.35■■□□□ 1.65
YBX3-202ENST00000279550 ANAPC15P60006 121 aa25.35■■□□□ 1.65
YBX3-202ENST00000279550 DDR1Q08345 913 aa25.35■■□□□ 1.65
YBX3-202ENST00000279550 SF3B3Q15393 1217 aaKnown RBP25.35■■□□□ 1.65
YBX3-202ENST00000279550 HSPA4P34932 840 aa25.34■■□□□ 1.65
YBX3-202ENST00000279550 CCDC24Q8N4L8 307 aa25.34■■□□□ 1.65
YBX3-202ENST00000279550 EDC3Q96F86 508 aaKnown RBP25.34■■□□□ 1.65
YBX3-202ENST00000279550 PRR5LQ6MZQ0 368 aa25.34■■□□□ 1.65
YBX3-202ENST00000279550 NLRP3Q96P20 1036 aa25.34■■□□□ 1.65
YBX3-202ENST00000279550 ST18O60284 1047 aa25.33■■□□□ 1.65
YBX3-202ENST00000279550 NMIQ13287 307 aaPredicted RBP25.33■■□□□ 1.65
YBX3-202ENST00000279550 LDHAL6AQ6ZMR3 332 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 RUFY2Q8WXA3 655 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 FAM227BQ96M60 508 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 SEC31BQ9NQW1 1179 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 ZNF609O15014 1411 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 NEK4P51957 841 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 PTH1RQ03431 593 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 GPR108Q9NPR9 543 aa25.32■■□□□ 1.64
YBX3-202ENST00000279550 RIC1Q4ADV7 1423 aa25.31■■□□□ 1.64
YBX3-202ENST00000279550 LRP5O75197 1615 aa25.31■■□□□ 1.64
YBX3-202ENST00000279550 HSP90AA1P07900 732 aaKnown RBP25.31■■□□□ 1.64
YBX3-202ENST00000279550 ST5P78524 1137 aa25.31■■□□□ 1.64
YBX3-202ENST00000279550 FSD1Q9BTV5 496 aa25.31■■□□□ 1.64
YBX3-202ENST00000279550 CIZ1Q9ULV3 898 aaPredicted RBP25.31■■□□□ 1.64
YBX3-202ENST00000279550 NDUFB9Q9Y6M9 179 aa25.31■■□□□ 1.64
YBX3-202ENST00000279550 UPF1Q92900 1129 aaKnown RBP eCLIP25.3■■□□□ 1.64
YBX3-202ENST00000279550 RIPOR2Q9Y4F9 1068 aa25.3■■□□□ 1.64
YBX3-202ENST00000279550 CASZ1Q86V15 1759 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 KIAA1211Q6ZU35 1233 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 TNRC6CQ9HCJ0 1690 aaKnown RBP25.29■■□□□ 1.64
YBX3-202ENST00000279550 A0A0D9SFI3 127 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 MMP10P09238 476 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 TIMM10P62072 90 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 CDC5LQ99459 802 aaKnown RBP25.29■■□□□ 1.64
YBX3-202ENST00000279550 CNNM1Q9NRU3 951 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 SNX14Q9Y5W7 946 aa25.29■■□□□ 1.64
YBX3-202ENST00000279550 HIP1O00291 1037 aa25.28■■□□□ 1.64
YBX3-202ENST00000279550 RASEFQ8IZ41 740 aa25.28■■□□□ 1.64
YBX3-202ENST00000279550 NEUROD6Q96NK8 337 aa25.28■■□□□ 1.64
YBX3-202ENST00000279550 MPHOSPH8Q99549 860 aa25.27■■□□□ 1.64
YBX3-202ENST00000279550 HAUS7Q99871 368 aa25.27■■□□□ 1.64
YBX3-202ENST00000279550 CEP126Q9P2H0 1117 aa25.27■■□□□ 1.64
YBX3-202ENST00000279550 IGHMBP2P38935 993 aaKnown RBP25.26■■□□□ 1.63
YBX3-202ENST00000279550 DNAJC2Q99543 621 aaKnown RBP25.26■■□□□ 1.63
YBX3-202ENST00000279550 UPF3BQ9BZI7 483 aaKnown RBP25.26■■□□□ 1.63
YBX3-202ENST00000279550 SNRKQ9NRH2 765 aa25.26■■□□□ 1.63
YBX3-202ENST00000279550 DEKP35659 375 aaKnown RBP25.26■■□□□ 1.63
YBX3-202ENST00000279550 PDGFDQ9GZP0 370 aaPredicted RBP25.26■■□□□ 1.63
YBX3-202ENST00000279550 NRXN2Q9P2S2 1712 aa25.26■■□□□ 1.63
YBX3-202ENST00000279550 PARP3Q9Y6F1 533 aa25.26■■□□□ 1.63
YBX3-202ENST00000279550 MED23Q9ULK4 1368 aa25.25■■□□□ 1.63
YBX3-202ENST00000279550 CCDC171Q6TFL3 1326 aa25.25■■□□□ 1.63
YBX3-202ENST00000279550 METTL24Q5JXM2 366 aa25.25■■□□□ 1.63
YBX3-202ENST00000279550 COL4A1P02462 1669 aa25.24■■□□□ 1.63
YBX3-202ENST00000279550 A0A1B0GUL7 405 aa25.24■■□□□ 1.63
YBX3-202ENST00000279550 ANKRD18AQ8IVF6 992 aa25.24■■□□□ 1.63
YBX3-202ENST00000279550 RAB3GAP1Q15042 981 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 MROH5Q6ZUA9 1318 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 CHGBP05060 677 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 MCM4P33991 863 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 CRY2Q49AN0 593 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
YBX3-202ENST00000279550 VGLL2Q8N8G2 317 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 AKAP2Q9Y2D5 859 aa25.23■■□□□ 1.63
YBX3-202ENST00000279550 ZGPATQ8N5A5 531 aaKnown RBP25.22■■□□□ 1.63
YBX3-202ENST00000279550 CELF1Q92879 486 aaKnown RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms