RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 BAIAP2L1Q9UHR4 511 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 MAPK8IP1Q9UQF2 711 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 A0A1B0GUA9 196 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 SYCP3Q8IZU3 236 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 MICAL1Q8TDZ2 1067 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 BRF1Q92994 677 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 FEZ2Q9UHY8 353 aaPredicted RBP9.04□□□□□ -0.96
CLTC-201ENST00000269122 ANKRD50Q9ULJ7 1429 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 E7EVH7 732 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 LIG3P49916 1009 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 BMP2KLQ5H9B9 411 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 RAB3IL1Q8TBN0 382 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 SBNO2Q9Y2G9 1366 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 TTC36A6NLP5 189 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 NFE2L2Q16236 605 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 E2F4Q16254 413 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 CCDC50Q8IVM0 306 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 CHAMP1Q96JM3 812 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 CFAP57Q96MR6 1250 aa9.04□□□□□ -0.96
CLTC-201ENST00000269122 IQCGQ9H095 443 aaKnown RBP9.04□□□□□ -0.96
CLTC-201ENST00000269122 PPANQ9NQ55 473 aaKnown RBP9.04□□□□□ -0.96
CLTC-201ENST00000269122 RRBP1Q9P2E9 1410 aaKnown RBP9.04□□□□□ -0.96
CLTC-201ENST00000269122 TATP17735 454 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 DDX46Q7L014 1031 aaKnown RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 CAPN7Q9Y6W3 813 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 NCOA2Q15596 1464 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 CUX1P39880 1505 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 STAT6P42226 847 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 ZNF131P52739 623 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 SESN3P58005 492 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 ANXA1P04083 346 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 TPD52P55327 224 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 FAM173BQ6P4H8 233 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 CEP120Q8N960 986 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 RFC1P35251 1148 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 LACTBP83111 547 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 UTP14CQ5TAP6 766 aaKnown RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 WDR78Q5VTH9 848 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 STMN2Q93045 179 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 SELENOOQ9BVL4 669 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 ANKRD30BQ9BXX2 1392 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 PTPROQ16827 1216 aa9.03□□□□□ -0.96
CLTC-201ENST00000269122 BAG1Q99933 345 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 ZBTB12Q9Y330 459 aaPredicted RBP9.03□□□□□ -0.96
CLTC-201ENST00000269122 CCDC194A0A1B0GVG4 234 aa9.02□□□□□ -0.96
CLTC-201ENST00000269122 AK2P54819 239 aa9.02□□□□□ -0.96
CLTC-201ENST00000269122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.02□□□□□ -0.961e-14■□□□□ 8.4
CLTC-201ENST00000269122 ATP1A2P50993 1020 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 FANCD2Q9BXW9 1451 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 FERP16591 822 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 CYLC1P35663 651 aaPredicted RBP9.02□□□□□ -0.97
CLTC-201ENST00000269122 IARSP41252 1262 aaKnown RBP9.02□□□□□ -0.97
CLTC-201ENST00000269122 CCDC122Q5T0U0 273 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 DZIP1Q86YF9 867 aaKnown RBP9.02□□□□□ -0.97
CLTC-201ENST00000269122 FERMT2Q96AC1 680 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 DESP17661 470 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 GBP7Q8N8V2 638 aaPredicted RBP9.02□□□□□ -0.97
CLTC-201ENST00000269122 SMC6Q96SB8 1091 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 AQRO60306 1485 aaKnown RBP eCLIP9.02□□□□□ -0.972e-7■■■■■ 28.6
CLTC-201ENST00000269122 KIF5AQ12840 1032 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 ALG1Q9BT22 464 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 KLF18A0A0U1RQI7 1052 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 FAM184BQ9ULE4 1060 aa9.02□□□□□ -0.97
CLTC-201ENST00000269122 INTS8Q75QN2 995 aaKnown RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 RPUSD2Q8IZ73 545 aaKnown RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 ERO1AQ96HE7 468 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 UIMC1Q96RL1 719 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 MRVI1Q9Y6F6 885 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 WDHD1O75717 1129 aaPredicted RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 ZFYP08048 801 aaPredicted RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 EEF2P13639 858 aaKnown RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 CALML4Q96GE6 196 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 CTNND2Q9UQB3 1225 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 TOP2AP11388 1531 aaKnown RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 ANKRD18BA2A2Z9 1011 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 GNAT3A8MTJ3 354 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 TACC1O75410 805 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 UBA7P41226 1012 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 TTLL12Q14166 644 aaPredicted RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 APOBRQ0VD83 1088 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 VPS16Q9H269 839 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 CTCFLQ8NI51 663 aaPredicted RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 MRPS27Q92552 414 aaKnown RBP9.01□□□□□ -0.97
CLTC-201ENST00000269122 ERCC6LQ2NKX8 1250 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 EHBP1Q8NDI1 1231 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 GSDMBQ8TAX9 411 aa9.01□□□□□ -0.97
CLTC-201ENST00000269122 ANKRD65E5RJM6 399 aa9□□□□□ -0.97
CLTC-201ENST00000269122 NOL3O60936 208 aaKnown RBP9□□□□□ -0.97
CLTC-201ENST00000269122 ZWINTO95229 277 aa9□□□□□ -0.97
CLTC-201ENST00000269122 DMTNQ08495 405 aa9□□□□□ -0.97
CLTC-201ENST00000269122 PPP1R7Q15435 360 aa9□□□□□ -0.97
CLTC-201ENST00000269122 GKAP1Q5VSY0 366 aaPredicted RBP9□□□□□ -0.97
CLTC-201ENST00000269122 PPP1R42Q7Z4L9 355 aa9□□□□□ -0.97
CLTC-201ENST00000269122 EVI5LQ96CN4 794 aa9□□□□□ -0.97
CLTC-201ENST00000269122 MYCBPQ99417 103 aaPredicted RBP9□□□□□ -0.97
CLTC-201ENST00000269122 MEIS3Q99687 375 aa9□□□□□ -0.97
CLTC-201ENST00000269122 MAP3K2Q9Y2U5 619 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms