RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ABCC3O15438 1527 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 GCC2Q8IWJ2 1684 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 WDR66Q8TBY9 1149 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 NUP62CLQ9H1M0 184 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 RBM27Q9P2N5 1060 aaKnown RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 RTL1A6NKG5 1358 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 SH2D4AQ9H788 454 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 TCP11L1Q9NUJ3 509 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 MRE11P49959 708 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 CCDC148Q8NFR7 591 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 ZBTB43O43298 467 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 DESP17661 470 aa16.15■□□□□ 0.18
CDH1-201ENST00000261769 NASPP49321 788 aaPredicted RBP16.15■□□□□ 0.18
CDH1-201ENST00000261769 AATKQ6ZMQ8 1374 aa16.14■□□□□ 0.18
CDH1-201ENST00000261769 CBFA2T2O43439 604 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 SDSP20132 328 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 TCIRG1Q13488 830 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 LOC102724428A0A0B4J2F2 783 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 SIK1P57059 783 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 MAGEB6Q8N7X4 407 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 ATP7BP35670 1465 aa16.14■□□□□ 0.17
CDH1-201ENST00000261769 CCP110O43303 1012 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 CALM1P0DP23 149 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 CALM2P0DP24 149 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 CALM3P0DP25 149 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 G2E3Q7L622 706 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 NIM1KQ8IY84 436 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 A2ML1A8K2U0 1454 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 THRAP3Q9Y2W1 955 aaKnown RBP16.13■□□□□ 0.17
CDH1-201ENST00000261769 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
CDH1-201ENST00000261769 IBSPP21815 317 aaPredicted RBP16.13■□□□□ 0.17
CDH1-201ENST00000261769 PYM1Q9BRP8 204 aaKnown RBP16.13■□□□□ 0.17
CDH1-201ENST00000261769 KLF18A0A0U1RQI7 1052 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 GCKRQ14397 625 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 CALML4Q96GE6 196 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 SLC26A6Q9BXS9 759 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 TEX11Q8IYF3 940 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 USP6P35125 1406 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 GPR162Q16538 588 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 MPNDQ8N594 471 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 RBM8AQ9Y5S9 174 aaKnown RBP16.12■□□□□ 0.17
CDH1-201ENST00000261769 ANKARQ7Z5J8 1434 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 A0A1B0GUL7 405 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 IGHDP01880 384 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 RPS8P62241 208 aaKnown RBP16.12■□□□□ 0.17
CDH1-201ENST00000261769 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 RTN1Q16799 776 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 TBC1D22AQ8WUA7 517 aa16.12■□□□□ 0.17
CDH1-201ENST00000261769 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
CDH1-201ENST00000261769 CNKSR1Q969H4 720 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 TSG101Q99816 390 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 CCDC144CPQ8IYA2 1237 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 LPIN2Q92539 896 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 BRF1Q92994 677 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 AMPD3Q01432 767 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 ZBTB40Q9NUA8 1239 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 MNS1Q8NEH6 495 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
CDH1-201ENST00000261769 MROH5Q6ZUA9 1318 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 FGFR1OPO95684 399 aaKnown RBP16.1■□□□□ 0.17
CDH1-201ENST00000261769 ANAPC15P60006 121 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 STXBP4Q6ZWJ1 553 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 BMP15O95972 392 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 UBA7P41226 1012 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 PRDM15P57071 1507 aaPredicted RBP16.1■□□□□ 0.17
CDH1-201ENST00000261769 RAD50Q92878 1312 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 TRIM37O94972 964 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 POTEJP0CG39 1038 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 IL17REQ8NFR9 667 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 ERMNQ8TAM6 284 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 ESYT1Q9BSJ8 1104 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
CDH1-201ENST00000261769 USP19O94966 1318 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 LRRC27Q9C0I9 530 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 BCS1LQ9Y276 419 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 SPATA31A3Q5VYP0 1347 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 NOM1Q5C9Z4 860 aaKnown RBP16.09■□□□□ 0.17
CDH1-201ENST00000261769 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 ERBB3P21860 1342 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 RTL9Q8NET4 1388 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 MAP3K4Q9Y6R4 1608 aa16.09■□□□□ 0.17
CDH1-201ENST00000261769 SEPT12Q8IYM1 358 aa16.08■□□□□ 0.17
CDH1-201ENST00000261769 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.17
CDH1-201ENST00000261769 MAP3K11Q16584 847 aa16.08■□□□□ 0.17
CDH1-201ENST00000261769 PPIP5K2O43314 1243 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 RBM25P49756 843 aaKnown RBP16.08■□□□□ 0.16
CDH1-201ENST00000261769 TIMM10P62072 90 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 DPY19L2Q6NUT2 758 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 CAGE1Q8TC20 777 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 H7C1D1 291 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 TMEM87AQ8NBN3 555 aa16.08■□□□□ 0.16
CDH1-201ENST00000261769 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms