RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ANKRD36CQ5JPF3 1778 aa21.36■■□□□ 1.01
SSB-201ENST00000260956 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
SSB-201ENST00000260956 SIL1Q9H173 461 aa21.36■■□□□ 1.01
SSB-201ENST00000260956 TRAK2O60296 914 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 SERPINB2P05120 415 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
SSB-201ENST00000260956 CCDC24Q8N4L8 307 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 SNX14Q9Y5W7 946 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 MED23Q9ULK4 1368 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 TTC14Q96N46 770 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 GBP4Q96PP9 640 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 ISCA1Q9BUE6 129 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 CCDC8Q9H0W5 538 aaPredicted RBP21.35■■□□□ 1.01
SSB-201ENST00000260956 NIP7Q9Y221 180 aaKnown RBP eCLIP21.35■■□□□ 1.01
SSB-201ENST00000260956 ZDHHC9Q9Y397 364 aa21.35■■□□□ 1.01
SSB-201ENST00000260956 UBN2Q6ZU65 1347 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 GPTP24298 496 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 RASEFQ8IZ41 740 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 SETDB2Q96T68 719 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 DBNLQ9UJU6 430 aaKnown RBP21.34■■□□□ 1.01
SSB-201ENST00000260956 RFX7Q2KHR2 1363 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 CARMIL3Q8ND23 1372 aa21.34■■□□□ 1.01
SSB-201ENST00000260956 FSD2A1L4K1 749 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 RGL2O15211 777 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 PKP1Q13835 747 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 TNNI3KQ59H18 835 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 CWC27Q6UX04 472 aaKnown RBP21.33■■□□□ 1.01
SSB-201ENST00000260956 CCDC191Q8NCU4 936 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 CWC25Q9NXE8 425 aaPredicted RBP21.33■■□□□ 1.01
SSB-201ENST00000260956 FPGT-TNNI3KV9GXZ4 949 aa21.33■■□□□ 1.01
SSB-201ENST00000260956 NUCB2P80303 420 aa21.32■■□□□ 1
SSB-201ENST00000260956 ZNF34Q8IZ26 560 aa21.32■■□□□ 1
SSB-201ENST00000260956 ZNF652Q9Y2D9 606 aa21.32■■□□□ 1
SSB-201ENST00000260956 FAM177BA6PVY3 158 aa21.32■■□□□ 1
SSB-201ENST00000260956 BAG4O95429 457 aaKnown RBP21.32■■□□□ 1
SSB-201ENST00000260956 PTH1RQ03431 593 aa21.32■■□□□ 1
SSB-201ENST00000260956 DIAPH3Q9NSV4 1193 aa21.32■■□□□ 1
SSB-201ENST00000260956 NUP98P52948 1817 aa21.32■■□□□ 1
SSB-201ENST00000260956 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
SSB-201ENST00000260956 ATP5JP18859 108 aa21.31■■□□□ 1
SSB-201ENST00000260956 TFCP2Q12800 502 aa21.31■■□□□ 1
SSB-201ENST00000260956 TRIM28Q13263 835 aaKnown RBP21.31■■□□□ 1
SSB-201ENST00000260956 PRR5LQ6MZQ0 368 aa21.31■■□□□ 1
SSB-201ENST00000260956 LMBR1LQ6UX01 489 aa21.31■■□□□ 1
SSB-201ENST00000260956 ATG9AQ7Z3C6 839 aa21.31■■□□□ 1
SSB-201ENST00000260956 INTS4Q96HW7 963 aaKnown RBP21.31■■□□□ 1
SSB-201ENST00000260956 UPF3BQ9BZI7 483 aaKnown RBP21.31■■□□□ 1
SSB-201ENST00000260956 CD2APQ9Y5K6 639 aa21.31■■□□□ 1
SSB-201ENST00000260956 RUFY2Q8WXA3 655 aa21.3■■□□□ 1
SSB-201ENST00000260956 CCDC171Q6TFL3 1326 aa21.3■■□□□ 1
SSB-201ENST00000260956 ZNF609O15014 1411 aa21.3■■□□□ 1
SSB-201ENST00000260956 NRXN2Q9P2S2 1712 aa21.3■■□□□ 1
SSB-201ENST00000260956 SUSD4Q5VX71 490 aa21.29■■□□□ 1
SSB-201ENST00000260956 NMIQ13287 307 aaPredicted RBP21.29■■□□□ 1
SSB-201ENST00000260956 TCIRG1Q13488 830 aa21.29■■□□□ 1
SSB-201ENST00000260956 SPEF2Q9C093 1822 aa21.29■■□□□ 1
SSB-201ENST00000260956 RPAP1Q9BWH6 1393 aaPredicted RBP21.28■■□□□ 1
SSB-201ENST00000260956 HIP1O00291 1037 aa21.28■■□□□ 1
SSB-201ENST00000260956 PTMSP20962 102 aa21.28■■□□□ 1
SSB-201ENST00000260956 NECTIN1Q15223 517 aa21.28■■□□□ 1
SSB-201ENST00000260956 FAM227BQ96M60 508 aa21.28■■□□□ 1
SSB-201ENST00000260956 WWC3Q9ULE0 1092 aa21.28■■□□□ 1
SSB-201ENST00000260956 A0A0D9SFI3 127 aa21.27■■□□□ 1
SSB-201ENST00000260956 A0A0G2JLW4 131 aa21.27■■□□□ 1
SSB-201ENST00000260956 KCNA3P22001 575 aa21.27■■□□□ 1
SSB-201ENST00000260956 NBPF5PQ86XG9 351 aaPredicted RBP21.27■■□□□ 1
SSB-201ENST00000260956 GPR108Q9NPR9 543 aa21.27■■□□□ 1
SSB-201ENST00000260956 SYNE4Q8N205 404 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 TM6SF1Q9BZW5 370 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 BOLA2Q9H3K6 86 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 CHRNA5P30532 468 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 NLRP10Q86W26 655 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 CNBD1Q8NA66 436 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 MAP4K1Q92918 833 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 DBNDD2Q9BQY9 259 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 PLA2G12BQ9BX93 195 aa21.26■□□□□ 0.99
SSB-201ENST00000260956 KIF13BQ9NQT8 1826 aa21.25■□□□□ 0.99
SSB-201ENST00000260956 KIAA1551Q9HCM1 1747 aa21.25■□□□□ 0.99
SSB-201ENST00000260956 NTSR2O95665 410 aa21.25■□□□□ 0.99
SSB-201ENST00000260956 DPEP1P16444 411 aa21.25■□□□□ 0.99
SSB-201ENST00000260956 KIAA1211Q6ZU35 1233 aa21.25■□□□□ 0.99
SSB-201ENST00000260956 CIAO1O76071 339 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 BRD1O95696 1058 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 ABCC12Q96J65 1359 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 MYH3P11055 1940 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 ERFEQ4G0M1 354 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 RUFY3Q7L099 469 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 EDC3Q96F86 508 aaKnown RBP21.24■□□□□ 0.99
SSB-201ENST00000260956 HAUS7Q99871 368 aa21.24■□□□□ 0.99
SSB-201ENST00000260956 SKOR2Q2VWA4 1001 aaPredicted RBP21.23■□□□□ 0.99
SSB-201ENST00000260956 TPTE2Q6XPS3 522 aa21.23■□□□□ 0.99
SSB-201ENST00000260956 ZSWIM6Q9HCJ5 1215 aa21.23■□□□□ 0.99
SSB-201ENST00000260956 RBM8AQ9Y5S9 174 aaKnown RBP21.23■□□□□ 0.99
SSB-201ENST00000260956 PCCAP05165 728 aaPredicted RBP21.22■□□□□ 0.99
SSB-201ENST00000260956 ADCK5Q3MIX3 580 aa21.22■□□□□ 0.99
SSB-201ENST00000260956 FSD1Q9BTV5 496 aa21.22■□□□□ 0.99
SSB-201ENST00000260956 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
SSB-201ENST00000260956 ANKRD31Q8N7Z5 1873 aa21.22■□□□□ 0.99
SSB-201ENST00000260956 EYA2O00167 538 aa21.21■□□□□ 0.99
SSB-201ENST00000260956 IL15P40933 162 aaPredicted RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms