RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LRRC37AA6NMS7 1700 aa21■□□□□ 0.95
SDCBP-201ENST00000260130 RLBP1P12271 317 aa20.99■□□□□ 0.95
SDCBP-201ENST00000260130 MS4A1P11836 297 aa20.99■□□□□ 0.95
SDCBP-201ENST00000260130 TAF7LQ5H9L4 462 aa20.99■□□□□ 0.95
SDCBP-201ENST00000260130 JDP2Q8WYK2 163 aa20.99■□□□□ 0.95
SDCBP-201ENST00000260130 POLLQ9UGP5 575 aa20.99■□□□□ 0.95
SDCBP-201ENST00000260130 C6orf229H3BNL8 230 aa20.98■□□□□ 0.95
SDCBP-201ENST00000260130 PPIP5K2O43314 1243 aa20.98■□□□□ 0.95
SDCBP-201ENST00000260130 LARGE2Q8N3Y3 721 aa20.98■□□□□ 0.95
SDCBP-201ENST00000260130 ZNF594Q96JF6 807 aaPredicted RBP20.98■□□□□ 0.95
SDCBP-201ENST00000260130 LRRFIP2Q9Y608 721 aaKnown RBP20.98■□□□□ 0.95
SDCBP-201ENST00000260130 AOC3Q16853 763 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 TBC1D16Q8TBP0 767 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 ZNF526Q8TF50 670 aaPredicted RBP20.97■□□□□ 0.95
SDCBP-201ENST00000260130 XDHP47989 1333 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 PLIN1O60240 522 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 LDHAL6AQ6ZMR3 332 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 GGA1Q9UJY5 639 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 CCDC88AQ3V6T2 1871 aa20.97■□□□□ 0.95
SDCBP-201ENST00000260130 KIAA2012Q0VF49 1180 aa20.96■□□□□ 0.95
SDCBP-201ENST00000260130 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
SDCBP-201ENST00000260130 PANK1Q8TE04 598 aa20.96■□□□□ 0.95
SDCBP-201ENST00000260130 WASHC4Q2M389 1173 aa20.96■□□□□ 0.95
SDCBP-201ENST00000260130 DUOX1Q9NRD9 1551 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 UFL1O94874 794 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 DPY19L2Q6NUT2 758 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.95■□□□□ 0.94
SDCBP-201ENST00000260130 EYA3Q99504 573 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 ANKRD2Q9GZV1 360 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
SDCBP-201ENST00000260130 GLTPD2A6NH11 291 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 FZD9O00144 591 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 ATP2B4P23634 1241 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 CNNM1Q9NRU3 951 aa20.95■□□□□ 0.94
SDCBP-201ENST00000260130 GNAI2P04899 355 aa20.94■□□□□ 0.94
SDCBP-201ENST00000260130 CHRNDQ07001 517 aa20.94■□□□□ 0.94
SDCBP-201ENST00000260130 NIM1KQ8IY84 436 aa20.94■□□□□ 0.94
SDCBP-201ENST00000260130 KDM2BQ8NHM5 1336 aa20.94■□□□□ 0.94
SDCBP-201ENST00000260130 DICER1Q9UPY3 1922 aaKnown RBP20.94■□□□□ 0.94
SDCBP-201ENST00000260130 ZBTB7BO15156 539 aaPredicted RBP20.93■□□□□ 0.94
SDCBP-201ENST00000260130 RIMBP2O15034 1052 aa20.93■□□□□ 0.94
SDCBP-201ENST00000260130 GPR101Q96P66 508 aaPredicted RBP20.93■□□□□ 0.94
SDCBP-201ENST00000260130 ZC3H12CQ9C0D7 883 aaKnown RBP20.93■□□□□ 0.94
SDCBP-201ENST00000260130 TIAM2Q8IVF5 1701 aa20.92■□□□□ 0.94
SDCBP-201ENST00000260130 COL4A5P29400 1685 aa20.92■□□□□ 0.94
SDCBP-201ENST00000260130 LEMD3Q9Y2U8 911 aa20.92■□□□□ 0.94
SDCBP-201ENST00000260130 LTBP1Q14766 1721 aa20.92■□□□□ 0.94
SDCBP-201ENST00000260130 RFX5P48382 616 aaPredicted RBP20.92■□□□□ 0.94
SDCBP-201ENST00000260130 PUS3Q9BZE2 481 aaKnown RBP20.92■□□□□ 0.94
SDCBP-201ENST00000260130 WTIPA6NIX2 430 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-201ENST00000260130 EIF6P56537 245 aaKnown RBP20.91■□□□□ 0.94
SDCBP-201ENST00000260130 KLHDC4Q8TBB5 520 aa20.91■□□□□ 0.94
SDCBP-201ENST00000260130 ZNRF3Q9ULT6 936 aa20.91■□□□□ 0.94
SDCBP-201ENST00000260130 RIPOR2Q9Y4F9 1068 aa20.9■□□□□ 0.94
SDCBP-201ENST00000260130 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
SDCBP-201ENST00000260130 ZNF541Q9H0D2 1346 aa20.9■□□□□ 0.94
SDCBP-201ENST00000260130 DDNO94850 711 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-201ENST00000260130 PTPN12Q05209 780 aaKnown RBP20.9■□□□□ 0.94
SDCBP-201ENST00000260130 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
SDCBP-201ENST00000260130 HELBQ8NG08 1087 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-201ENST00000260130 ZNF804BA4D1E1 1349 aa20.89■□□□□ 0.94
SDCBP-201ENST00000260130 TAF5LO75529 589 aa20.89■□□□□ 0.94
SDCBP-201ENST00000260130 MTX1Q13505 466 aa20.89■□□□□ 0.94
SDCBP-201ENST00000260130 MVPQ14764 893 aaKnown RBP20.89■□□□□ 0.93
SDCBP-201ENST00000260130 LRRC24Q50LG9 513 aa20.89■□□□□ 0.93
SDCBP-201ENST00000260130 COG6Q9Y2V7 657 aa20.89■□□□□ 0.93
SDCBP-201ENST00000260130 KCNJ4P48050 445 aa20.88■□□□□ 0.93
SDCBP-201ENST00000260130 DBNDD1Q9H9R9 158 aa20.88■□□□□ 0.93
SDCBP-201ENST00000260130 NMRK2Q9NPI5 230 aa20.88■□□□□ 0.93
SDCBP-201ENST00000260130 MROH5Q6ZUA9 1318 aa20.88■□□□□ 0.93
SDCBP-201ENST00000260130 SRGAP3O43295 1099 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 DOK7Q18PE1 504 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 G3V3G9 751 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 C20orf194Q5TEA3 1177 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 GPC2Q8N158 579 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 RRAGCQ9HB90 399 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 DDX19BQ9UMR2 479 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 MED23Q9ULK4 1368 aa20.87■□□□□ 0.93
SDCBP-201ENST00000260130 EYA2O00167 538 aa20.86■□□□□ 0.93
SDCBP-201ENST00000260130 CXCL9Q07325 125 aa20.86■□□□□ 0.93
SDCBP-201ENST00000260130 YDJCA8MPS7 323 aa20.86■□□□□ 0.93
SDCBP-201ENST00000260130 SNAP23O00161 211 aa20.86■□□□□ 0.93
SDCBP-201ENST00000260130 ECE2O60344 883 aa20.86■□□□□ 0.93
SDCBP-201ENST00000260130 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
SDCBP-201ENST00000260130 COPRSQ9NQ92 184 aa20.85■□□□□ 0.93
SDCBP-201ENST00000260130 FBXO3Q9UK99 471 aa20.85■□□□□ 0.93
SDCBP-201ENST00000260130 GJA3Q9Y6H8 435 aa20.85■□□□□ 0.93
SDCBP-201ENST00000260130 METTL24Q5JXM2 366 aa20.85■□□□□ 0.93
SDCBP-201ENST00000260130 RAD17O75943 681 aa20.84■□□□□ 0.93
SDCBP-201ENST00000260130 VEGFAP15692 232 aaPredicted RBP20.84■□□□□ 0.93
SDCBP-201ENST00000260130 TXNRD3Q86VQ6 643 aa20.84■□□□□ 0.93
SDCBP-201ENST00000260130 SIL1Q9H173 461 aa20.84■□□□□ 0.93
SDCBP-201ENST00000260130 PA2G4Q9UQ80 394 aaKnown RBP20.84■□□□□ 0.93
SDCBP-201ENST00000260130 PNMA6EA0A0J9YXQ4 647 aa20.83■□□□□ 0.93
SDCBP-201ENST00000260130 KIF3CO14782 793 aa20.83■□□□□ 0.93
SDCBP-201ENST00000260130 RRP1P56182 461 aaKnown RBP20.83■□□□□ 0.93
SDCBP-201ENST00000260130 TNIP1Q15025 636 aa20.83■□□□□ 0.93
SDCBP-201ENST00000260130 CIAPIN1Q6FI81 312 aa20.83■□□□□ 0.93
SDCBP-201ENST00000260130 L3MBTL3Q96JM7 780 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms