RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 SUCLG2Q96I99 432 aa16.24■□□□□ 0.19
CDK7-201ENST00000256443 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
CDK7-201ENST00000256443 GGA1Q9UJY5 639 aa16.24■□□□□ 0.19
CDK7-201ENST00000256443 HDAC5Q9UQL6 1122 aa16.24■□□□□ 0.19
CDK7-201ENST00000256443 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
CDK7-201ENST00000256443 ATP2B4P23634 1241 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 EPHA10Q5JZY3 1008 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 GPC2Q8N158 579 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 FRAT1Q92837 279 aaPredicted RBP16.23■□□□□ 0.19
CDK7-201ENST00000256443 POLLQ9UGP5 575 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 ZNRF3Q9ULT6 936 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 MINPP1Q9UNW1 487 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 ZNF541Q9H0D2 1346 aa16.23■□□□□ 0.19
CDK7-201ENST00000256443 TOMM70O94826 608 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 UFL1O94874 794 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 C1QTNF8P60827 252 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 RABL6Q3YEC7 729 aaPredicted RBP16.22■□□□□ 0.19
CDK7-201ENST00000256443 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 ZKSCAN2Q63HK3 967 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 INTS3Q68E01 1043 aaKnown RBP16.22■□□□□ 0.19
CDK7-201ENST00000256443 KAZALD1Q96I82 304 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 L3MBTL3Q96JM7 780 aaPredicted RBP16.22■□□□□ 0.19
CDK7-201ENST00000256443 ANKRD2Q9GZV1 360 aa16.22■□□□□ 0.19
CDK7-201ENST00000256443 IQCA1LA6NCM1 817 aa16.21■□□□□ 0.19
CDK7-201ENST00000256443 TRIM27P14373 513 aa16.21■□□□□ 0.19
CDK7-201ENST00000256443 ZC3H12CQ9C0D7 883 aaKnown RBP16.21■□□□□ 0.19
CDK7-201ENST00000256443 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
CDK7-201ENST00000256443 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
CDK7-201ENST00000256443 LEMD3Q9Y2U8 911 aa16.2■□□□□ 0.18
CDK7-201ENST00000256443 A0A1B0GUL6 1792 aa16.2■□□□□ 0.18
CDK7-201ENST00000256443 RIMBP2O15034 1052 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 RBM46Q8TBY0 533 aaKnown RBP16.19■□□□□ 0.18
CDK7-201ENST00000256443 MED23Q9ULK4 1368 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 POTECB2RU33 542 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 G3V3G9 751 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 TNIP1Q15025 636 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 DCAF8Q5TAQ9 597 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 CIAPIN1Q6FI81 312 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 GJA3Q9Y6H8 435 aa16.19■□□□□ 0.18
CDK7-201ENST00000256443 GNAI3P08754 354 aa16.18■□□□□ 0.18
CDK7-201ENST00000256443 CHRNDQ07001 517 aa16.18■□□□□ 0.18
CDK7-201ENST00000256443 ANKRD44Q8N8A2 993 aa16.18■□□□□ 0.18
CDK7-201ENST00000256443 CNNM1Q9NRU3 951 aa16.18■□□□□ 0.18
CDK7-201ENST00000256443 HACL1Q9UJ83 578 aa16.18■□□□□ 0.18
CDK7-201ENST00000256443 ECE2O60344 883 aa16.17■□□□□ 0.18
CDK7-201ENST00000256443 LMOD1P29536 600 aaPredicted RBP16.17■□□□□ 0.18
CDK7-201ENST00000256443 CXCL9Q07325 125 aa16.17■□□□□ 0.18
CDK7-201ENST00000256443 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
CDK7-201ENST00000256443 DBNDD1Q9H9R9 158 aa16.17■□□□□ 0.18
CDK7-201ENST00000256443 PSME4Q14997 1843 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 ZNF804BA4D1E1 1349 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 KCNJ4P48050 445 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 FSTL1Q12841 308 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 CLUAP1Q96AJ1 413 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 ZNF594Q96JF6 807 aaPredicted RBP16.16■□□□□ 0.18
CDK7-201ENST00000256443 GPR101Q96P66 508 aaPredicted RBP16.16■□□□□ 0.18
CDK7-201ENST00000256443 MEIS3Q99687 375 aa16.16■□□□□ 0.18
CDK7-201ENST00000256443 YDJCA8MPS7 323 aa16.15■□□□□ 0.18
CDK7-201ENST00000256443 DOK7Q18PE1 504 aa16.15■□□□□ 0.18
CDK7-201ENST00000256443 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
CDK7-201ENST00000256443 SMC1BQ8NDV3 1235 aa16.15■□□□□ 0.18
CDK7-201ENST00000256443 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
CDK7-201ENST00000256443 RAD17O75943 681 aa16.14■□□□□ 0.17
CDK7-201ENST00000256443 MS4A1P11836 297 aa16.14■□□□□ 0.17
CDK7-201ENST00000256443 EPHX2P34913 555 aa16.14■□□□□ 0.17
CDK7-201ENST00000256443 PNMA8AQ86V59 439 aaPredicted RBP16.14■□□□□ 0.17
CDK7-201ENST00000256443 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
CDK7-201ENST00000256443 TNNQ9UQP3 1299 aa16.14■□□□□ 0.17
CDK7-201ENST00000256443 MROH5Q6ZUA9 1318 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 SCN9AQ15858 1988 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 SCNN1DP51172 638 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 C15orf52Q6ZUT6 534 aaKnown RBP16.13■□□□□ 0.17
CDK7-201ENST00000256443 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 COA1Q9GZY4 146 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 RCAN3Q9UKA8 241 aa16.13■□□□□ 0.17
CDK7-201ENST00000256443 LRRFIP2Q9Y608 721 aaKnown RBP16.13■□□□□ 0.17
CDK7-201ENST00000256443 TAF5LO75529 589 aa16.12■□□□□ 0.17
CDK7-201ENST00000256443 RPS12P25398 132 aaKnown RBP16.12■□□□□ 0.17
CDK7-201ENST00000256443 FBXO3Q9UK99 471 aa16.12■□□□□ 0.17
CDK7-201ENST00000256443 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
CDK7-201ENST00000256443 PSMD14O00487 310 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 GNAI2P04899 355 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 GMPSP49915 693 aaPredicted RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 HELBQ8NG08 1087 aaPredicted RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 DPF2Q92785 391 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 GPRC5DQ9NZD1 345 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 ADAMTSL1Q8N6G6 1762 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 ZNF609O15014 1411 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 WTIPA6NIX2 430 aaPredicted RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 PLIN1O60240 522 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 UBE4AQ14139 1066 aa16.11■□□□□ 0.17
CDK7-201ENST00000256443 USP50Q70EL3 339 aaPredicted RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 ADARB2Q9NS39 739 aaKnown RBP16.11■□□□□ 0.17
CDK7-201ENST00000256443 EYA2O00167 538 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms