RNA–Protein interactions for RNA: ENST00000250066.6

USP6-201, Transcript of ubiquitin specific peptidase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP6, Length 7,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-201ENST00000250066 CCDC102BQ68D86 513 aa9.8□□□□□ -0.84
USP6-201ENST00000250066 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
USP6-201ENST00000250066 IFIT3O14879 490 aaKnown RBP9.8□□□□□ -0.84
USP6-201ENST00000250066 SLF2Q8IX21 1173 aa9.8□□□□□ -0.84
USP6-201ENST00000250066 GGNBP2Q9H3C7 697 aa9.8□□□□□ -0.84
USP6-201ENST00000250066 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 PPME1Q9Y570 386 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 E7EVH7 732 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 DNAJC8O75937 253 aaPredicted RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 CALCOCO2Q13137 446 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 RAPGEF2Q9Y4G8 1499 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 EXOSC9Q06265 439 aaKnown RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 MAP3K12Q12852 859 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 TCP11L2Q8N4U5 519 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 RNF10Q8N5U6 811 aaKnown RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 UBE2Q2Q8WVN8 375 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 SH3BGRP55822 239 aaPredicted RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 BIRC2Q13490 618 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 PNISRQ8TF01 805 aaKnown RBP9.79□□□□□ -0.84
USP6-201ENST00000250066 CHMP2AO43633 222 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 ATF7IPQ6VMQ6 1270 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 SPECC1L-ADORA2AF8WAN1 911 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 GBP5Q96PP8 586 aa9.79□□□□□ -0.84
USP6-201ENST00000250066 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 SYF2O95926 243 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 KRT83P78385 493 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 RPGRIP1LQ68CZ1 1315 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 IL1RAPL2Q9NP60 686 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 PPANQ9NQ55 473 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 GLRX3O76003 335 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 STAT6P42226 847 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 ITIH3Q06033 890 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 BAG1Q99933 345 aaPredicted RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 ZNF652Q9Y2D9 606 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 MAP3K7CLP57077 242 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 PANK2Q9BZ23 570 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 TRIM35Q9UPQ4 493 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 HMGB2P26583 209 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 KIFC2Q96AC6 838 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 CAPZA3Q96KX2 299 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 CCT2P78371 535 aaKnown RBP9.78□□□□□ -0.84
USP6-201ENST00000250066 VTI1AQ96AJ9 217 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 CSRNP2Q9H175 543 aa9.78□□□□□ -0.84
USP6-201ENST00000250066 TUBBP07437 444 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 CCDC85AQ96PX6 553 aaPredicted RBP9.77□□□□□ -0.84
USP6-201ENST00000250066 MX2P20592 715 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 IRX4P78413 519 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 HDXQ7Z353 690 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 KIF1BPQ96EK5 621 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 HAUS8Q9BT25 410 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 AGTPBP1Q9UPW5 1226 aa9.77□□□□□ -0.84
USP6-201ENST00000250066 IFIT1P09914 478 aaKnown RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 UBE2HP62256 183 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 VAT1LQ9HCJ6 419 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 HPDP32754 393 aaPredicted RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 KRBA2Q6ZNG9 492 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 SRGAP1Q7Z6B7 1085 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 BCAP29Q9UHQ4 241 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 MROH2BQ7Z745 1585 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 PRPF40BQ6NWY9 871 aaKnown RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 CCDC7Q96M83 1385 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 SKILP12757 684 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 PPP1R21Q6ZMI0 780 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 ATICP31939 592 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 SYKP43405 635 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 PDCD2Q16342 344 aaPredicted RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 CCDC26Q8TAB7 109 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 ADAMTS8Q9UP79 889 aa9.77□□□□□ -0.85
USP6-201ENST00000250066 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.85
USP6-201ENST00000250066 NBPF7P0C2Y1 421 aaPredicted RBP9.76□□□□□ -0.85
USP6-201ENST00000250066 TOM1L2Q6ZVM7 507 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 POTEDQ86YR6 584 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 TMEM57Q8N5G2 664 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 ZBTB9Q96C00 473 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 LIMCH1Q9UPQ0 1083 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 GIGYF1O75420 1035 aaPredicted RBP9.76□□□□□ -0.85
USP6-201ENST00000250066 SPG7Q9UQ90 795 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 BTBD11A6QL63 1104 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 INPP5BP32019 993 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 PPP2R5CQ13362 524 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 NBPF8Q3BBV2 869 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 TSGA10Q9BZW7 698 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 MRPL46Q9H2W6 279 aaKnown RBP9.76□□□□□ -0.85
USP6-201ENST00000250066 TFIP11Q9UBB9 837 aaKnown RBP9.76□□□□□ -0.85
USP6-201ENST00000250066 BICDL1Q6ZP65 573 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 MCM10Q7L590 875 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 ZNF710Q8N1W2 664 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 FAM13AO94988 1023 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 TNNC1P63316 161 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 GABPAQ06546 454 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 NDUFAB1O14561 156 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 OPHN1O60890 802 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 RASSF2P50749 326 aa9.76□□□□□ -0.85
USP6-201ENST00000250066 CCDC122Q5T0U0 273 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms