RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 F8W8V4 182 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 CNNM3Q8NE01 707 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 RRP36Q96EU6 259 aaKnown RBP8.45□□□□□ -1.06
MED28-201ENST00000237380 MAK16Q9BXY0 300 aaKnown RBP8.45□□□□□ -1.06
MED28-201ENST00000237380 ANAPC4Q9UJX5 808 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 MTIF2P46199 727 aaKnown RBP8.45□□□□□ -1.06
MED28-201ENST00000237380 CFAP58Q5T655 872 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 TTC6Q86TZ1 520 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 PPIP5K1Q6PFW1 1433 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 ATP5J2-PTCD1G3V325 749 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 FIBPO43427 364 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 DNM2P50570 870 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 CWC27Q6UX04 472 aaKnown RBP8.45□□□□□ -1.06
MED28-201ENST00000237380 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 TEKT1Q969V4 418 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 EXOC7Q9UPT5 735 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 GOLGA8AA7E2F4 631 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 GOLGA8BA8MQT2 603 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 H0YIN7 160 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 OTUD6BQ8N6M0 293 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 ARHGEF37A1IGU5 675 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 GOLGA8CPA6NN73 597 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 STK11IPQ8N1F8 1099 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 CCDC110Q8TBZ0 833 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 UHRF1BP1LA0JNW5 1464 aa8.45□□□□□ -1.06
MED28-201ENST00000237380 BICDL2A1A5D9 508 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 PFDN6O15212 129 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 CEBPZQ03701 1054 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 TMEM67Q5HYA8 995 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 DAAM2Q86T65 1068 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 WASLO00401 505 aaPredicted RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 SWAP70Q9UH65 585 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 H7C1D1 291 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 CCT6BQ92526 530 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 NUP88Q99567 741 aaPredicted RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 NSRP1Q9H0G5 558 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 ZNF518AQ6AHZ1 1483 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 RPL13P26373 211 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 EXOSC9Q06265 439 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 TDRD12Q587J7 1177 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 TRIM6Q9C030 488 aaPredicted RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 UHRF1BP1Q6BDS2 1440 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 GIPC1O14908 333 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 P4HA1P13674 534 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 IARSP41252 1262 aaKnown RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 GRM1Q13255 1194 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 CUL4BQ13620 913 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 TRAPPC3LQ5T215 181 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 NSD3Q9BZ95 1437 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 MCM5P33992 734 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 SPAG1Q07617 926 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 TAF3Q5VWG9 929 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 ZEB2O60315 1214 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 NOX5Q96PH1 765 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 PPP1R9BQ96SB3 815 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 DUOX2Q9NRD8 1548 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 SFPQP23246 707 aaKnown RBP eCLIP8.44□□□□□ -1.06
MED28-201ENST00000237380 PLCD3Q8N3E9 789 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 ABCD1P33897 745 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 ARL1P40616 181 aaPredicted RBP8.44□□□□□ -1.06
MED28-201ENST00000237380 TCERG1LQ5VWI1 586 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 FAM8A1Q9UBU6 413 aa8.44□□□□□ -1.06
MED28-201ENST00000237380 TBC1D31Q96DN5 1066 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 C8orf37Q96NL8 207 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 STK3Q13188 491 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 IFT74Q96LB3 600 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
MED28-201ENST00000237380 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.43□□□□□ -1.06
MED28-201ENST00000237380 PARP10Q53GL7 1025 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 PCDH11XQ9BZA7 1347 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 PCDH11YQ9BZA8 1340 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 SMC1BQ8NDV3 1235 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 NACA2Q9H009 215 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.43□□□□□ -1.06
MED28-201ENST00000237380 TOP1P11387 765 aaKnown RBP8.43□□□□□ -1.06
MED28-201ENST00000237380 CBX1P83916 185 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 YWHAEP62258 255 aaKnown RBP8.43□□□□□ -1.06
MED28-201ENST00000237380 USH1CQ9Y6N9 552 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 MACROD2A1Z1Q3 448 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 XPCQ01831 940 aaPredicted RBP8.43□□□□□ -1.06
MED28-201ENST00000237380 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.43□□□□□ -1.06
MED28-201ENST00000237380 ARID3AQ99856 593 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
MED28-201ENST00000237380 FAM13AO94988 1023 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 WTAPQ15007 396 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 TIGD1Q96MW7 591 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 ZNF277Q9NRM2 450 aaPredicted RBP8.42□□□□□ -1.06
MED28-201ENST00000237380 NESP48681 1621 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 RAPGEF3O95398 923 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 HOXA7P31268 230 aaPredicted RBP8.42□□□□□ -1.06
MED28-201ENST00000237380 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 ODR4Q5SWX8 454 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 NOP56O00567 594 aaKnown RBP8.42□□□□□ -1.06
MED28-201ENST00000237380 IL2RBP14784 551 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 ARID5AQ03989 594 aa8.42□□□□□ -1.06
MED28-201ENST00000237380 SPECC1Q5M775 1068 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms