RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 USP48Q86UV5 1035 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 AACSQ86V21 672 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 SLC27A3Q5K4L6 730 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 ALDH8A1Q9H2A2 487 aaPredicted RBP29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 LRRC4BQ9NT99 713 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 CCDC39Q9UFE4 941 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 C4BP0C0L5 1744 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 CCDC171Q6TFL3 1326 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 ZNF500O60304 480 aaPredicted RBP29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 TPM2P07951 284 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 CASTP20810 708 aaKnown RBP29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 PSMA5P28066 241 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 PDRG1Q9NUG6 133 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 ANKRD36CQ5JPF3 1778 aa29.74■■■□□ 2.35
RUNDC3A-201ENST00000225441 RPS6KA4O75676 772 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 UBE3BQ7Z3V4 1068 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 KAZALD1Q96I82 304 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 H7C1W4 665 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 OFD1O75665 1012 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 CAMTA2O94983 1202 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 CASP7P55210 303 aa29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.73■■■□□ 2.35
RUNDC3A-201ENST00000225441 NUP98P52948 1817 aa29.72■■■□□ 2.35
RUNDC3A-201ENST00000225441 EP400Q96L91 3159 aa29.72■■■□□ 2.35
RUNDC3A-201ENST00000225441 SYT1P21579 422 aa29.72■■■□□ 2.35
RUNDC3A-201ENST00000225441 UBE2HP62256 183 aa29.72■■■□□ 2.35
RUNDC3A-201ENST00000225441 MAP4K1Q92918 833 aa29.72■■■□□ 2.35
RUNDC3A-201ENST00000225441 GNPATO15228 680 aa29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 SASH1O94885 1247 aa29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 F13A1P00488 732 aa29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 CCDC183Q5T5S1 534 aa29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 JARID2Q92833 1246 aaPredicted RBP29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 BICC1Q9H694 974 aaKnown RBP29.71■■■□□ 2.35
RUNDC3A-201ENST00000225441 PTH1RQ03431 593 aa29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 ANKRD1Q15327 319 aa29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 RNF20Q5VTR2 975 aa29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 CHAMP1Q96JM3 812 aa29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 JAKMIP1Q96N16 626 aaKnown RBP29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 PA2G4Q9UQ80 394 aaKnown RBP29.7■■■□□ 2.34
RUNDC3A-201ENST00000225441 BCORQ6W2J9 1755 aa29.69■■■□□ 2.34
RUNDC3A-201ENST00000225441 RFX7Q2KHR2 1363 aa29.69■■■□□ 2.34
RUNDC3A-201ENST00000225441 PLSCR1O15162 318 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 APBA3O96018 575 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 GPTP24298 496 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 PRPF40BQ6NWY9 871 aaKnown RBP29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 NLRP10Q86W26 655 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 RTCBQ9Y3I0 505 aaKnown RBP29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 TNS1Q9HBL0 1735 aaKnown RBP29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 TXNRD1Q16881 649 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 ZNF34Q8IZ26 560 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 EAF2Q96CJ1 260 aaPredicted RBP29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 HMG20BQ9P0W2 317 aa29.68■■■□□ 2.34
RUNDC3A-201ENST00000225441 TSGA10IPQ3SY00 556 aa29.67■■■□□ 2.34
RUNDC3A-201ENST00000225441 TICAM2Q86XR7 235 aa29.67■■■□□ 2.34
RUNDC3A-201ENST00000225441 AK7Q96M32 723 aa29.67■■■□□ 2.34
RUNDC3A-201ENST00000225441 ZKSCAN5Q9Y2L8 839 aa29.67■■■□□ 2.34
RUNDC3A-201ENST00000225441 EPHA10Q5JZY3 1008 aa29.66■■■□□ 2.34
RUNDC3A-201ENST00000225441 CREB3L3Q68CJ9 461 aa29.66■■■□□ 2.34
RUNDC3A-201ENST00000225441 RBM8AQ9Y5S9 174 aaKnown RBP29.66■■■□□ 2.34
RUNDC3A-201ENST00000225441 PROM2Q8N271 834 aa29.66■■■□□ 2.34
RUNDC3A-201ENST00000225441 COPRSQ9NQ92 184 aa29.66■■■□□ 2.34
RUNDC3A-201ENST00000225441 GADD45BO75293 160 aaPredicted RBP29.65■■■□□ 2.34
RUNDC3A-201ENST00000225441 PCCAP05165 728 aaPredicted RBP29.65■■■□□ 2.34
RUNDC3A-201ENST00000225441 SMIM5Q71RC9 77 aa29.65■■■□□ 2.34
RUNDC3A-201ENST00000225441 ZNF652Q9Y2D9 606 aa29.65■■■□□ 2.34
RUNDC3A-201ENST00000225441 SCN7AQ01118 1682 aa29.65■■■□□ 2.34
RUNDC3A-201ENST00000225441 RGL2O15211 777 aa29.64■■■□□ 2.34
RUNDC3A-201ENST00000225441 PDCP20941 246 aa29.64■■■□□ 2.33
RUNDC3A-201ENST00000225441 HMGB2P26583 209 aaKnown RBP29.64■■■□□ 2.33
RUNDC3A-201ENST00000225441 ZBTB38Q8NAP3 1195 aaPredicted RBP29.64■■■□□ 2.33
RUNDC3A-201ENST00000225441 UBN2Q6ZU65 1347 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 MED23Q9ULK4 1368 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 GJB2P29033 226 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 NMIQ13287 307 aaPredicted RBP29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 RABL6Q3YEC7 729 aaPredicted RBP29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 CLEC4GQ6UXB4 293 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 AMIGO3Q86WK7 504 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 NARFQ9UHQ1 456 aa29.63■■■□□ 2.33
RUNDC3A-201ENST00000225441 MTMR6Q9Y217 621 aa29.62■■■□□ 2.33
RUNDC3A-201ENST00000225441 KCNJ4P48050 445 aa29.61■■■□□ 2.33
RUNDC3A-201ENST00000225441 ADCK5Q3MIX3 580 aa29.61■■■□□ 2.33
RUNDC3A-201ENST00000225441 CNPY2Q9Y2B0 182 aa29.61■■■□□ 2.33
RUNDC3A-201ENST00000225441 SLC27A2O14975 620 aa29.61■■■□□ 2.33
RUNDC3A-201ENST00000225441 ATP5JP18859 108 aa29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 FOXO4P98177 505 aa29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 KRT32Q14532 448 aa29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 CCDC83Q8IWF9 413 aa29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 ARHGEF1Q92888 912 aaKnown RBP29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 FAM89AQ96GI7 184 aa29.6■■■□□ 2.33
RUNDC3A-201ENST00000225441 PARP10Q53GL7 1025 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 FSD1Q9BTV5 496 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 CDHR2Q9BYE9 1310 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 RGPD3A6NKT7 1758 aaPredicted RBP29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 RGPD4Q7Z3J3 1758 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 ADRA2BP18089 450 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 TRAPPC3LQ5T215 181 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 GDPD2Q9HCC8 539 aa29.59■■■□□ 2.33
RUNDC3A-201ENST00000225441 UBR3Q6ZT12 1888 aa29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 TCHHQ07283 1943 aa29.58■■■□□ 2.33
RUNDC3A-201ENST00000225441 USPL1Q5W0Q7 1092 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms