RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 U3KPZ7 1027 aaPredicted RBP17.32■□□□□ 0.36
CNOT3-201ENST00000221232 C5P01031 1676 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 MST1RQ04912 1400 aa17.32■□□□□ 0.36
CNOT3-201ENST00000221232 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
CNOT3-201ENST00000221232 SCRN1Q12765 414 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 RAB11FIP4Q86YS3 637 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 FAM13BQ9NYF5 915 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 HAND2P61296 217 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 USPL1Q5W0Q7 1092 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 LUZP1Q86V48 1076 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 GTF3C6Q969F1 213 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 FUCA2Q9BTY2 467 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 SPATA31A3Q5VYP0 1347 aa17.31■□□□□ 0.36
CNOT3-201ENST00000221232 A0A1B0GUL7 405 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 KRT32Q14532 448 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
CNOT3-201ENST00000221232 PHRF1Q9P1Y6 1649 aaKnown RBP17.3■□□□□ 0.36
CNOT3-201ENST00000221232 UVSSAQ2YD98 709 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 GPHNQ9NQX3 736 aaPredicted RBP17.3■□□□□ 0.36
CNOT3-201ENST00000221232 NR1I2O75469 434 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 TPM2P07951 284 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 CCDC192P0DO97 292 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 ADORA1P30542 326 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 EVA1CP58658 441 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 TNMDQ9H2S6 317 aa17.3■□□□□ 0.36
CNOT3-201ENST00000221232 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
CNOT3-201ENST00000221232 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 UQCRHP07919 91 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 WASHC4Q2M389 1173 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 MAP3K11Q16584 847 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 PGBD1Q96JS3 809 aa17.29■□□□□ 0.36
CNOT3-201ENST00000221232 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
CNOT3-201ENST00000221232 EYA2O00167 538 aa17.28■□□□□ 0.36
CNOT3-201ENST00000221232 PI16Q6UXB8 463 aa17.28■□□□□ 0.36
CNOT3-201ENST00000221232 A0A087WWV3 80 aa17.28■□□□□ 0.36
CNOT3-201ENST00000221232 GPTP24298 496 aa17.28■□□□□ 0.36
CNOT3-201ENST00000221232 HSPD1P10809 573 aaKnown RBP17.27■□□□□ 0.36
CNOT3-201ENST00000221232 TYRO3Q06418 890 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 TAF7LQ5H9L4 462 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
CNOT3-201ENST00000221232 BRINP3Q76B58 766 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 FBXW7Q969H0 707 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 M0R2C6 588 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 IL15P40933 162 aaPredicted RBP17.27■□□□□ 0.36
CNOT3-201ENST00000221232 CCDC57Q2TAC2 916 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
CNOT3-201ENST00000221232 CEP126Q9P2H0 1117 aa17.27■□□□□ 0.36
CNOT3-201ENST00000221232 MCM5P33992 734 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 ANO6Q4KMQ2 910 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
CNOT3-201ENST00000221232 TSC1Q92574 1164 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 SIPA1L3O60292 1781 aaPredicted RBP17.26■□□□□ 0.35
CNOT3-201ENST00000221232 E7EWF7 191 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 OSBP2Q969R2 916 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 ASAP1Q9ULH1 1129 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 SCARF1Q14162 830 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 OTUD7BQ6GQQ9 843 aa17.26■□□□□ 0.35
CNOT3-201ENST00000221232 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 A0A0G2JS52 829 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 ERCC4Q92889 916 aaPredicted RBP17.25■□□□□ 0.35
CNOT3-201ENST00000221232 MAST3O60307 1309 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 PTPDC1A2A3K4 754 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 RESTQ13127 1097 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 NOLC1Q14978 699 aaKnown RBP eCLIP17.25■□□□□ 0.35
CNOT3-201ENST00000221232 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
CNOT3-201ENST00000221232 RNF113AO15541 343 aaKnown RBP17.24■□□□□ 0.35
CNOT3-201ENST00000221232 IL2RBP14784 551 aa17.24■□□□□ 0.35
CNOT3-201ENST00000221232 ZMYM1Q5SVZ6 1142 aa17.24■□□□□ 0.35
CNOT3-201ENST00000221232 DRC7Q8IY82 874 aa17.24■□□□□ 0.35
CNOT3-201ENST00000221232 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
CNOT3-201ENST00000221232 ALDH8A1Q9H2A2 487 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-201ENST00000221232 WDR17Q8IZU2 1322 aa17.24■□□□□ 0.35
CNOT3-201ENST00000221232 ZNF142P52746 1687 aaPredicted RBP17.24■□□□□ 0.35
CNOT3-201ENST00000221232 NSUN7Q8NE18 718 aaKnown RBP17.23■□□□□ 0.35
CNOT3-201ENST00000221232 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
CNOT3-201ENST00000221232 DNAJC25Q9H1X3 360 aa17.23■□□□□ 0.35
CNOT3-201ENST00000221232 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
CNOT3-201ENST00000221232 CBX8Q9HC52 389 aa17.23■□□□□ 0.35
CNOT3-201ENST00000221232 HELLSQ9NRZ9 838 aa17.23■□□□□ 0.35
CNOT3-201ENST00000221232 ZAP70P43403 619 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 SYTL4Q96C24 671 aaPredicted RBP17.22■□□□□ 0.35
CNOT3-201ENST00000221232 GJB4Q9NTQ9 266 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 PYCARDQ9ULZ3 195 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 JCADQ9P266 1359 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 ERVV-2B6SEH9 535 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 CCDC158Q5M9N0 1113 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
CNOT3-201ENST00000221232 RRP9O43818 475 aaKnown RBP17.22■□□□□ 0.35
CNOT3-201ENST00000221232 PFKFB2O60825 505 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms