RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 LRRC24Q50LG9 513 aa33.17■■■□□ 2.9
STUB1-201ENST00000219548 RPAP2Q8IXW5 612 aaPredicted RBP33.17■■■□□ 2.9
STUB1-201ENST00000219548 TMX4Q9H1E5 349 aaPredicted RBP33.17■■■□□ 2.9
STUB1-201ENST00000219548 SOGA3Q5TF21 947 aa33.16■■■□□ 2.9
STUB1-201ENST00000219548 MINPP1Q9UNW1 487 aa33.16■■■□□ 2.9
STUB1-201ENST00000219548 PCDHB15Q9Y5E8 787 aa33.16■■■□□ 2.9
STUB1-201ENST00000219548 CCDC88AQ3V6T2 1871 aa33.15■■■□□ 2.9
STUB1-201ENST00000219548 COPRSQ9NQ92 184 aa33.15■■■□□ 2.9
STUB1-201ENST00000219548 GPSM2P81274 684 aa33.14■■■□□ 2.9
STUB1-201ENST00000219548 CC2D2BQ6DHV5 1058 aa33.14■■■□□ 2.9
STUB1-201ENST00000219548 DUOX1Q9NRD9 1551 aa33.13■■■□□ 2.89
STUB1-201ENST00000219548 ARHGAP27Q6ZUM4 889 aa33.13■■■□□ 2.89
STUB1-201ENST00000219548 EYA2O00167 538 aa33.12■■■□□ 2.89
STUB1-201ENST00000219548 CHRNDQ07001 517 aa33.12■■■□□ 2.89
STUB1-201ENST00000219548 NSFL1CQ9UNZ2 370 aaKnown RBP33.12■■■□□ 2.89
STUB1-201ENST00000219548 RIPOR2Q9Y4F9 1068 aa33.12■■■□□ 2.89
STUB1-201ENST00000219548 MPNDQ8N594 471 aa33.12■■■□□ 2.89
STUB1-201ENST00000219548 SBF1O95248 1867 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 NFKBIEO00221 500 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 GRIN3BO60391 1043 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 RASSF7Q02833 373 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 RTKN2Q8IZC4 609 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 HELBQ8NG08 1087 aaPredicted RBP33.11■■■□□ 2.89
STUB1-201ENST00000219548 ANKIB1Q9P2G1 1089 aa33.11■■■□□ 2.89
STUB1-201ENST00000219548 DPP8Q6V1X1 898 aaPredicted RBP33.1■■■□□ 2.89
STUB1-201ENST00000219548 ATG9AQ7Z3C6 839 aa33.1■■■□□ 2.89
STUB1-201ENST00000219548 HMMRO75330 724 aa33.09■■■□□ 2.89
STUB1-201ENST00000219548 AAMPQ13685 434 aa33.09■■■□□ 2.89
STUB1-201ENST00000219548 DCAF8L1A6NGE4 600 aa33.08■■■□□ 2.89
STUB1-201ENST00000219548 TAF5LO75529 589 aa33.08■■■□□ 2.89
STUB1-201ENST00000219548 XDHP47989 1333 aa33.08■■■□□ 2.89
STUB1-201ENST00000219548 CIAO1O76071 339 aa33.07■■■□□ 2.88
STUB1-201ENST00000219548 TAOK3Q9H2K8 898 aa33.07■■■□□ 2.88
STUB1-201ENST00000219548 WTIPA6NIX2 430 aaPredicted RBP33.06■■■□□ 2.88
STUB1-201ENST00000219548 SURF6O75683 361 aaKnown RBP33.06■■■□□ 2.88
STUB1-201ENST00000219548 FKBP4Q02790 459 aaKnown RBP eCLIP33.06■■■□□ 2.88
STUB1-201ENST00000219548 GRIPAP1Q4V328 841 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 METTL24Q5JXM2 366 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 MROH5Q6ZUA9 1318 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 ANKRD2Q9GZV1 360 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 PODXL2Q9NZ53 605 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 FBXO3Q9UK99 471 aa33.06■■■□□ 2.88
STUB1-201ENST00000219548 NEFLP07196 543 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 POLLQ9UGP5 575 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 UFL1O94874 794 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 TBC1D16Q8TBP0 767 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 GPR101Q96P66 508 aaPredicted RBP33.05■■■□□ 2.88
STUB1-201ENST00000219548 PSMD1Q99460 953 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 EXOC6BQ9Y2D4 811 aa33.05■■■□□ 2.88
STUB1-201ENST00000219548 SNAP23O00161 211 aa33.04■■■□□ 2.88
STUB1-201ENST00000219548 IL15P40933 162 aaPredicted RBP33.04■■■□□ 2.88
STUB1-201ENST00000219548 G3BP1Q13283 466 aaKnown RBP eCLIP33.04■■■□□ 2.88
STUB1-201ENST00000219548 GGA1Q9UJY5 639 aa33.04■■■□□ 2.88
STUB1-201ENST00000219548 C6orf229H3BNL8 230 aa33.03■■■□□ 2.88
STUB1-201ENST00000219548 PRELPP51888 382 aa33.03■■■□□ 2.88
STUB1-201ENST00000219548 OS9Q13438 667 aaPredicted RBP33.03■■■□□ 2.88
STUB1-201ENST00000219548 RTFDC1Q9BY42 306 aaPredicted RBP33.03■■■□□ 2.88
STUB1-201ENST00000219548 ZNF277Q9NRM2 450 aaPredicted RBP33.03■■■□□ 2.88
STUB1-201ENST00000219548 NOP58Q9Y2X3 529 aaKnown RBP33.03■■■□□ 2.88
STUB1-201ENST00000219548 LTBP3Q9NS15 1303 aa33.02■■■□□ 2.88
STUB1-201ENST00000219548 VGLL2Q8N8G2 317 aa33.02■■■□□ 2.88
STUB1-201ENST00000219548 DICER1Q9UPY3 1922 aaKnown RBP33.02■■■□□ 2.88
STUB1-201ENST00000219548 ATP2B4P23634 1241 aa33■■■□□ 2.87
STUB1-201ENST00000219548 ZNF804BA4D1E1 1349 aa33■■■□□ 2.87
STUB1-201ENST00000219548 KCNJ4P48050 445 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP32.99■■■□□ 2.87
STUB1-201ENST00000219548 CHD4Q14839 1912 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 SASH1O94885 1247 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 PDE8BO95263 885 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 TFCP2Q12800 502 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 SUPT20HQ8NEM7 779 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 CEP126Q9P2H0 1117 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 LEMD3Q9Y2U8 911 aa32.99■■■□□ 2.87
STUB1-201ENST00000219548 AOC3Q16853 763 aa32.97■■■□□ 2.87
STUB1-201ENST00000219548 COL4A5P29400 1685 aa32.96■■■□□ 2.87
STUB1-201ENST00000219548 APBB1O00213 710 aa32.96■■■□□ 2.87
STUB1-201ENST00000219548 RIMBP2O15034 1052 aa32.96■■■□□ 2.87
STUB1-201ENST00000219548 KLRK1P26718 216 aa32.96■■■□□ 2.87
STUB1-201ENST00000219548 IARSP41252 1262 aaKnown RBP32.96■■■□□ 2.87
STUB1-201ENST00000219548 TIAM2Q8IVF5 1701 aa32.95■■■□□ 2.87
STUB1-201ENST00000219548 PPIP5K2O43314 1243 aa32.95■■■□□ 2.87
STUB1-201ENST00000219548 LMNB1P20700 586 aa32.94■■■□□ 2.86
STUB1-201ENST00000219548 HDAC1Q13547 482 aaPredicted RBP32.94■■■□□ 2.86
STUB1-201ENST00000219548 WASHC4Q2M389 1173 aa32.94■■■□□ 2.86
STUB1-201ENST00000219548 ARAP2Q8WZ64 1704 aa32.94■■■□□ 2.86
STUB1-201ENST00000219548 UBE4AQ14139 1066 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 PUM3Q15397 648 aaKnown RBP32.93■■■□□ 2.86
STUB1-201ENST00000219548 HSP90AB4PQ58FF6 505 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 EYA3Q99504 573 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 DCTPP1Q9H773 170 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 MED23Q9ULK4 1368 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 KIAA2012Q0VF49 1180 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 TXNRD3Q86VQ6 643 aa32.93■■■□□ 2.86
STUB1-201ENST00000219548 FGFR2P21802 821 aa32.92■■■□□ 2.86
STUB1-201ENST00000219548 ATP2B3Q16720 1220 aa32.92■■■□□ 2.86
STUB1-201ENST00000219548 LARGE2Q8N3Y3 721 aa32.92■■■□□ 2.86
STUB1-201ENST00000219548 ZC3H12CQ9C0D7 883 aaKnown RBP32.92■■■□□ 2.86
STUB1-201ENST00000219548 RNF181Q9P0P0 153 aa32.92■■■□□ 2.86
STUB1-201ENST00000219548 IGHDP01880 384 aa32.91■■■□□ 2.86
STUB1-201ENST00000219548 C9orf131Q5VYM1 1079 aa32.91■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms