RNA–Protein interactions for RNA: ENST00000204566.6

SPG21-201, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-201ENST00000204566 ISCA1Q9BUE6 129 aa28.73■■■□□ 2.19
SPG21-201ENST00000204566 PTMAP06454 111 aaKnown RBP28.73■■■□□ 2.19
SPG21-201ENST00000204566 G3BP1Q13283 466 aaKnown RBP eCLIP28.73■■■□□ 2.19
SPG21-201ENST00000204566 UBE3BQ7Z3V4 1068 aa28.73■■■□□ 2.19
SPG21-201ENST00000204566 CNPY2Q9Y2B0 182 aa28.73■■■□□ 2.19
SPG21-201ENST00000204566 HSP90AB3PQ58FF7 597 aa28.72■■■□□ 2.19
SPG21-201ENST00000204566 FAM182BQ5T319 152 aa28.72■■■□□ 2.19
SPG21-201ENST00000204566 RNF20Q5VTR2 975 aa28.72■■■□□ 2.19
SPG21-201ENST00000204566 GIGYF2Q6Y7W6 1299 aaKnown RBP28.72■■■□□ 2.19
SPG21-201ENST00000204566 EIF5P55010 431 aaKnown RBP28.71■■■□□ 2.19
SPG21-201ENST00000204566 AACSQ86V21 672 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 GDPD2Q9HCC8 539 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 PDCP20941 246 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 GJB2P29033 226 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 CASP7P55210 303 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 TRIM28Q13263 835 aaKnown RBP28.71■■■□□ 2.19
SPG21-201ENST00000204566 MAP4K1Q92918 833 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 LY75O60449 1722 aa28.71■■■□□ 2.19
SPG21-201ENST00000204566 BRWD3Q6RI45 1802 aa28.7■■■□□ 2.19
SPG21-201ENST00000204566 ERVV-1B6SEH8 477 aa28.7■■■□□ 2.18
SPG21-201ENST00000204566 H7C1W4 665 aa28.7■■■□□ 2.18
SPG21-201ENST00000204566 PTH1RQ03431 593 aa28.7■■■□□ 2.18
SPG21-201ENST00000204566 PRPF40BQ6NWY9 871 aaKnown RBP28.7■■■□□ 2.18
SPG21-201ENST00000204566 DZIP3Q86Y13 1208 aaKnown RBP28.7■■■□□ 2.18
SPG21-201ENST00000204566 MAP7D2Q96T17 732 aa28.7■■■□□ 2.18
SPG21-201ENST00000204566 MYH14Q7Z406 1995 aaKnown RBP28.69■■■□□ 2.18
SPG21-201ENST00000204566 KIAA2012Q0VF49 1180 aa28.69■■■□□ 2.18
SPG21-201ENST00000204566 PTF1AQ7RTS3 328 aa28.69■■■□□ 2.18
SPG21-201ENST00000204566 MTMR6Q9Y217 621 aa28.69■■■□□ 2.18
SPG21-201ENST00000204566 PDCL3Q9H2J4 239 aa28.69■■■□□ 2.18
SPG21-201ENST00000204566 HMG20BQ9P0W2 317 aa28.69■■■□□ 2.18
SPG21-201ENST00000204566 NUP98P52948 1817 aa28.68■■■□□ 2.18
SPG21-201ENST00000204566 RFX7Q2KHR2 1363 aa28.68■■■□□ 2.18
SPG21-201ENST00000204566 CCDC83Q8IWF9 413 aa28.68■■■□□ 2.18
SPG21-201ENST00000204566 RABL6Q3YEC7 729 aaPredicted RBP28.67■■■□□ 2.18
SPG21-201ENST00000204566 CREB3L3Q68CJ9 461 aa28.67■■■□□ 2.18
SPG21-201ENST00000204566 RBM8AQ9Y5S9 174 aaKnown RBP28.67■■■□□ 2.18
SPG21-201ENST00000204566 CNTNAP4Q9C0A0 1308 aa28.67■■■□□ 2.18
SPG21-201ENST00000204566 RBM6P78332 1123 aaKnown RBP28.66■■■□□ 2.18
SPG21-201ENST00000204566 TSGA10IPQ3SY00 556 aa28.65■■■□□ 2.18
SPG21-201ENST00000204566 EPHA10Q5JZY3 1008 aa28.65■■■□□ 2.18
SPG21-201ENST00000204566 LINC00116Q8NCU8 138 aa28.65■■■□□ 2.18
SPG21-201ENST00000204566 R3HCC1Q9Y3T6 440 aaKnown RBP28.65■■■□□ 2.18
SPG21-201ENST00000204566 ELP1O95163 1332 aa28.65■■■□□ 2.18
SPG21-201ENST00000204566 KCNJ4P48050 445 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 HLFQ16534 295 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 ADCK5Q3MIX3 580 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 FOXD4L6Q3SYB3 417 aaPredicted RBP28.64■■■□□ 2.18
SPG21-201ENST00000204566 SASS6Q6UVJ0 657 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 FOXD4L3Q6VB84 417 aaPredicted RBP28.64■■■□□ 2.18
SPG21-201ENST00000204566 KRT27Q7Z3Y8 459 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 PA2G4Q9UQ80 394 aaKnown RBP28.64■■■□□ 2.18
SPG21-201ENST00000204566 BCORQ6W2J9 1755 aa28.64■■■□□ 2.18
SPG21-201ENST00000204566 SASH1O94885 1247 aa28.64■■■□□ 2.17
SPG21-201ENST00000204566 LARGE1O95461 756 aa28.64■■■□□ 2.17
SPG21-201ENST00000204566 TPM3P06753 285 aa28.64■■■□□ 2.17
SPG21-201ENST00000204566 JARID2Q92833 1246 aaPredicted RBP28.64■■■□□ 2.17
SPG21-201ENST00000204566 MED23Q9ULK4 1368 aa28.63■■■□□ 2.17
SPG21-201ENST00000204566 FAM196AQ6ZSG2 479 aa28.63■■■□□ 2.17
SPG21-201ENST00000204566 MTERF4Q7Z6M4 381 aaKnown RBP28.63■■■□□ 2.17
SPG21-201ENST00000204566 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
SPG21-201ENST00000204566 TBC1D2BQ9UPU7 963 aa28.63■■■□□ 2.17
SPG21-201ENST00000204566 FIBPO43427 364 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 NMIQ13287 307 aaPredicted RBP28.62■■■□□ 2.17
SPG21-201ENST00000204566 FUCA2Q9BTY2 467 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 DYNC1I1O14576 645 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 SLC27A2O14975 620 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 KRT85P78386 507 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 KRT32Q14532 448 aa28.62■■■□□ 2.17
SPG21-201ENST00000204566 EAF2Q96CJ1 260 aaPredicted RBP28.62■■■□□ 2.17
SPG21-201ENST00000204566 PCCAP05165 728 aaPredicted RBP28.61■■■□□ 2.17
SPG21-201ENST00000204566 ME3Q16798 604 aa28.61■■■□□ 2.17
SPG21-201ENST00000204566 BLOC1S2Q6QNY1 142 aa28.61■■■□□ 2.17
SPG21-201ENST00000204566 CCNL1Q9UK58 526 aaPredicted RBP28.61■■■□□ 2.17
SPG21-201ENST00000204566 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.61■■■□□ 2.171e-8■□□□□ 9.3
SPG21-201ENST00000204566 TAF1LQ8IZX4 1826 aa28.61■■■□□ 2.17
SPG21-201ENST00000204566 KDM4AO75164 1064 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 NLRP10Q86W26 655 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 ZBTB38Q8NAP3 1195 aaPredicted RBP28.59■■■□□ 2.17
SPG21-201ENST00000204566 CPA1P15085 419 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 FOXO4P98177 505 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 RC3H1Q5TC82 1133 aaKnown RBP28.59■■■□□ 2.17
SPG21-201ENST00000204566 TICAM2Q86XR7 235 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 FSD1Q9BTV5 496 aa28.59■■■□□ 2.17
SPG21-201ENST00000204566 DNM1Q05193 864 aaKnown RBP28.58■■■□□ 2.17
SPG21-201ENST00000204566 PIBF1Q8WXW3 757 aa28.58■■■□□ 2.17
SPG21-201ENST00000204566 SCN7AQ01118 1682 aa28.58■■■□□ 2.17
SPG21-201ENST00000204566 CDHR2Q9BYE9 1310 aa28.58■■■□□ 2.17
SPG21-201ENST00000204566 CAMTA2O94983 1202 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 ADCY5O95622 1261 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 RPS6KB1P23443 525 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 GPTP24298 496 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 LARP1BQ659C4 914 aaKnown RBP28.57■■■□□ 2.16
SPG21-201ENST00000204566 COPRSQ9NQ92 184 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 CCDC192P0DO97 292 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 ST3GAL1Q11201 340 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 LMBR1LQ6UX01 489 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 ZNF34Q8IZ26 560 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 USP25Q9UHP3 1055 aa28.57■■■□□ 2.16
SPG21-201ENST00000204566 TPCN1Q9ULQ1 816 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms