RNA–Protein interactions for RNA: ENST00000175756.9

PTPN18-201, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN18, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-201ENST00000175756 USP28Q96RU2 1077 aa20■□□□□ 0.79
PTPN18-201ENST00000175756 TRIM29Q14134 588 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 PGBD1Q96JS3 809 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 DIP2CQ9Y2E4 1556 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 GOLGA8BA8MQT2 603 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 TAF5LO75529 589 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 URI1O94763 535 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-201ENST00000175756 SNW1Q13573 536 aaKnown RBP19.99■□□□□ 0.79
PTPN18-201ENST00000175756 TTC39AQ5SRH9 613 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 IFNKQ9P0W0 207 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 ORC3Q9UBD5 711 aaPredicted RBP19.99■□□□□ 0.79
PTPN18-201ENST00000175756 GCP02774 474 aa19.99■□□□□ 0.79
PTPN18-201ENST00000175756 SLC3A2P08195 630 aaKnown RBP19.99■□□□□ 0.79
PTPN18-201ENST00000175756 RRP12Q5JTH9 1297 aaKnown RBP19.99■□□□□ 0.79
PTPN18-201ENST00000175756 RXRAP19793 462 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 CPLX2Q6PUV4 134 aaKnown RBP19.98■□□□□ 0.79
PTPN18-201ENST00000175756 GTF3C6Q969F1 213 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 CHRNA2Q15822 529 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 TNNI3KQ59H18 835 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 ZNF215Q9UL58 517 aaPredicted RBP19.98■□□□□ 0.79
PTPN18-201ENST00000175756 FPGT-TNNI3KV9GXZ4 949 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 TOB2Q14106 344 aaPredicted RBP19.98■□□□□ 0.79
PTPN18-201ENST00000175756 PTPN21Q16825 1174 aa19.98■□□□□ 0.79
PTPN18-201ENST00000175756 DBNLQ9UJU6 430 aaKnown RBP19.98■□□□□ 0.79
PTPN18-201ENST00000175756 SIGLEC1Q9BZZ2 1709 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 POLR3GO15318 223 aaPredicted RBP19.97■□□□□ 0.79
PTPN18-201ENST00000175756 CTAGE5O15320 804 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 CYP21A2P08686 494 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 ELF2Q15723 593 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 CCDC144BQ3MJ40 725 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 SYT10Q6XYQ8 523 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 DHX32Q7L7V1 743 aaKnown RBP19.97■□□□□ 0.79
PTPN18-201ENST00000175756 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.97■□□□□ 0.79
PTPN18-201ENST00000175756 ZNF594Q96JF6 807 aaPredicted RBP19.97■□□□□ 0.79
PTPN18-201ENST00000175756 SCRN1Q12765 414 aa19.97■□□□□ 0.79
PTPN18-201ENST00000175756 KLF18A0A0U1RQI7 1052 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 EPHA10Q5JZY3 1008 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 SPTLC3Q9NUV7 552 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 MYO5BQ9ULV0 1848 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 TCHHQ07283 1943 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 GCKRQ14397 625 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 MRPS27Q92552 414 aaKnown RBP19.96■□□□□ 0.79
PTPN18-201ENST00000175756 BABAM1Q9NWV8 329 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 CCDC158Q5M9N0 1113 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 OLFM4Q6UX06 510 aa19.96■□□□□ 0.79
PTPN18-201ENST00000175756 PES1O00541 588 aaKnown RBP19.95■□□□□ 0.78
PTPN18-201ENST00000175756 UBXN4Q92575 508 aa19.95■□□□□ 0.78
PTPN18-201ENST00000175756 DNAI1Q9UI46 699 aa19.95■□□□□ 0.78
PTPN18-201ENST00000175756 PAG1Q9NWQ8 432 aa19.95■□□□□ 0.78
PTPN18-201ENST00000175756 DHX16O60231 1041 aaKnown RBP19.95■□□□□ 0.78
PTPN18-201ENST00000175756 REREQ9P2R6 1566 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
PTPN18-201ENST00000175756 HMGB1P09429 215 aaKnown RBP19.94■□□□□ 0.78
PTPN18-201ENST00000175756 ST3GAL1Q11201 340 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 CCDC57Q2TAC2 916 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 ZNF790Q6PG37 636 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 CABLES1Q8TDN4 633 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 ZNF496Q96IT1 587 aaPredicted RBP19.94■□□□□ 0.78
PTPN18-201ENST00000175756 USP27XA6NNY8 438 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 LRRC8AQ8IWT6 810 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 ZSWIM4Q9H7M6 989 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 HOXB7P09629 217 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 IMMTQ16891 758 aaKnown RBP19.94■□□□□ 0.78
PTPN18-201ENST00000175756 GPHNQ9NQX3 736 aaPredicted RBP19.94■□□□□ 0.78
PTPN18-201ENST00000175756 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
PTPN18-201ENST00000175756 KIF20BQ96Q89 1820 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 NEURL1BA8MQ27 555 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 TMEM131LA2VDJ0 1609 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 GJB4Q9NTQ9 266 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 ADCY9O60503 1353 aa19.93■□□□□ 0.78
PTPN18-201ENST00000175756 FAM160A1Q05DH4 1040 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 DMTNQ08495 405 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 NCBP1Q09161 790 aaKnown RBP19.92■□□□□ 0.78
PTPN18-201ENST00000175756 LRRFIP1Q32MZ4 808 aaKnown RBP19.92■□□□□ 0.78
PTPN18-201ENST00000175756 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 FUCA2Q9BTY2 467 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 GTPBP4Q9BZE4 634 aaKnown RBP19.92■□□□□ 0.78
PTPN18-201ENST00000175756 OGFRQ9NZT2 677 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 CHMP4CQ96CF2 233 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 ARGLU1Q9NWB6 273 aaPredicted RBP19.92■□□□□ 0.78
PTPN18-201ENST00000175756 TSPOAP1O95153 1857 aa19.92■□□□□ 0.78
PTPN18-201ENST00000175756 NEMFO60524 1076 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 PROSER2Q86WR7 435 aaPredicted RBP19.91■□□□□ 0.78
PTPN18-201ENST00000175756 KRT222Q8N1A0 295 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 TDRD7Q8NHU6 1098 aaKnown RBP19.91■□□□□ 0.78
PTPN18-201ENST00000175756 OVOS2A0A0J9YW53 1432 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 OVOS2Q6IE36 1432 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 SLU7O95391 586 aaKnown RBP19.91■□□□□ 0.78
PTPN18-201ENST00000175756 CAVIN2O95810 425 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 PODXL2Q9NZ53 605 aa19.91■□□□□ 0.78
PTPN18-201ENST00000175756 ELP1O95163 1332 aa19.9■□□□□ 0.78
PTPN18-201ENST00000175756 KDRP35968 1356 aa19.9■□□□□ 0.78
PTPN18-201ENST00000175756 SPTLC2O15270 562 aa19.9■□□□□ 0.78
PTPN18-201ENST00000175756 IGKV5-2P06315 115 aa19.9■□□□□ 0.78
PTPN18-201ENST00000175756 SNRPA1P09661 255 aaKnown RBP19.9■□□□□ 0.78
PTPN18-201ENST00000175756 CEP170BQ9Y4F5 1589 aaPredicted RBP19.9■□□□□ 0.78
PTPN18-201ENST00000175756 XPO4Q9C0E2 1151 aaKnown RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms