RNA–Protein interactions for RNA: ENSMUST00000110520.9

Trim9-201, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-201ENSMUST00000110520 Gm29094F6Q785 221 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Fam228bQ497Q6 232 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Taf3Q5HZG4 932 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Luzp1Q8R4U7 1068 aaKnown RBP11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 MthfsQ9D110 203 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 CemipQ8BI06 1361 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Abcc4E9Q236 1325 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ccdc112A0AUP1 442 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Stx8O88983 236 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ppp1r21Q3TDD9 780 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Iqsec3Q3TES0 1195 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Rad17Q6NXW6 688 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zbtb40Q6PCS8 1258 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Gnl2Q99LH1 728 aaKnown RBP11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ehbp1l1Q99MS7 1716 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ddit3P35639 168 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Pde4dQ01063 747 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Gzf1Q4VBD9 706 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Wdr24Q8CFJ9 790 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Smc2Q8CG48 1191 aaKnown RBP11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 Trim29Q8R2Q0 587 aa11.13□□□□□ -0.63
Trim9-201ENSMUST00000110520 NefhP19246 1090 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Dnajc5P60904 198 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Abtb2Q7TQI7 1024 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cep120Q7TSG1 988 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tmem119Q8R138 280 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Rdm1Q9CQK3 281 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 SelenooQ9DBC0 667 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Rai14Q9EP71 979 aaKnown RBP11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 IncenpQ9WU62 880 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Sel1lQ9Z2G6 790 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Speer4dL7N216 212 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 IntuQ059U7 942 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Leo1Q5XJE5 667 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Fam160b2Q80YR2 744 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Vps53Q8CCB4 832 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 SrrtQ99MR6 875 aaKnown RBP11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Znf704Q9ERQ3 566 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cdkl5Q3UTQ8 938 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zc3h12cQ5DTV4 884 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Trim56Q80VI1 734 aaKnown RBP11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Eno4Q8C042 619 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tmc2Q8R4P4 888 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 Lonrf3Q9D4H7 753 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 ParvgQ9ERD8 331 aa11.12□□□□□ -0.63
Trim9-201ENSMUST00000110520 TsksO54887 585 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Slc4a4O88343 1079 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Igfbp6P47880 238 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ccdc129Q14B48 1034 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 SdsQ8VBT2 327 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ttc37F8VPK0 1563 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ufl1Q8CCJ3 793 aaKnown RBP11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Terf2ipQ91VL8 393 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Psrc1Q9D0P7 329 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Dhx8A2A4P0 1244 aaKnown RBP11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cd22P35329 862 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ftl2P49945 183 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Itga6Q61739 1091 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Nxf7Q80SZ6 620 aaKnown RBP11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Kcnq3Q8K3F6 873 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Syt10Q9R0N4 523 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Adcy9P51830 1353 aa11.11□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tns3Q5SSZ5 1440 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ddb1Q3U1J4 1140 aaKnown RBP11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Nlrp9aQ66X03 949 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 9230110C19RikQ8CC70 267 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Mtmr3Q8K296 1196 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tpm3P21107 285 aaKnown RBP11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Nkx2-3P97334 362 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Smarcc1P97496 1104 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Trim25Q61510 634 aaKnown RBP11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zscan22Q8BGS5 496 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Lamb3Q61087 1168 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ttc12Q8BW49 704 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Fam193aQ8CGI1 1231 aaKnown RBP11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tmem2Q5FWI3 1383 aa11.1□□□□□ -0.63
Trim9-201ENSMUST00000110520 Hspd1P63038 573 aaKnown RBP11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 AglF8VPN4 1532 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Parp14Q2EMV9 1817 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Prl3d2F6R3P9 224 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Arid4aF8VPQ2 1261 aaKnown RBP11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Cbx1P83917 185 aaKnown RBP11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Slc14a2Q8R4T9 930 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 TnrQ8BYI9 1358 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Zfp51Q3U4L8 781 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Bsdc1Q80Y55 427 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Kri1Q8VDQ9 704 aaKnown RBP11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Tpm1P58771 284 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Ppm1fQ8CGA0 452 aa11.09□□□□□ -0.63
Trim9-201ENSMUST00000110520 Qser1A2BIE1 1698 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Bin2D3Z6Q9 489 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Lnx1O70263 728 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Dcaf5Q80T85 946 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Cadps2Q8BYR5 1297 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Plcd1Q8R3B1 756 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 BrapQ99MP8 591 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Acot9Q9R0X4 439 aaKnown RBP11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Stx1aO35526 288 aa11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Sptlc2P97363 560 aaKnown RBP11.08□□□□□ -0.64
Trim9-201ENSMUST00000110520 Ift57Q8BXG3 429 aa11.08□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 65.9 ms