RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Riok1Q922Q2 567 aa10.96□□□□□ -0.65
Usp28-201ENSMUST00000047349 Pard3Q99NH2 1333 aa10.96□□□□□ -0.65
Usp28-201ENSMUST00000047349 Mcm3P25206 812 aaKnown RBP10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Usp25P57080 1055 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Timm10P62073 90 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Atp8a2P98200 1148 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cfap157Q0VFX2 523 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Brinp3Q499E0 766 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 DpydQ8CHR6 1025 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Spata31d1bE9QA57 1361 aa10.96□□□□□ -0.66
Usp28-201ENSMUST00000047349 Zkscan7E9PVW1 718 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cd22P35329 862 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Pms1Q8K119 917 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Zfp142G5E869 1843 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ccnl1Q52KE7 532 aaKnown RBP10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Fam160b2Q80YR2 744 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ubxn4Q8VCH8 506 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ltb4r2Q9JJL9 360 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Mindy4Q3UQI9 744 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cdca8Q8BHX3 289 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ptcd1Q8C2E4 695 aaKnown RBP10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Atad2Q8CDM1 1040 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ndufa8Q9DCJ5 172 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Kcnn1Q9EQR3 537 aa10.95□□□□□ -0.66
Usp28-201ENSMUST00000047349 Prl7a2O54831 253 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Plcb3P51432 1234 aaKnown RBP10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Abca3Q8R420 1704 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Nop14Q8R3N1 860 aaKnown RBP10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 TnksQ6PFX9 1320 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Gse1Q3U3C9 1213 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Fsd1Q7TPM6 496 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Tmem67Q8BR76 992 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Nlrp3Q8R4B8 1033 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Gigyf1Q99MR1 1044 aaKnown RBP10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Zbtb22Q9Z0G7 638 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Gm973E9Q295 1059 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 TsksO54887 585 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Hspd1P63038 573 aaKnown RBP10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Tbc1d31Q6NXY1 996 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Smarcc2Q6PDG5 1213 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Naa30Q8CES0 364 aa10.94□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cfap99A0A140LIX9 648 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 NcapgE9PWG6 1004 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 ErmnQ5EBJ4 281 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Sytl4Q9R0Q1 673 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Gpatch3Q8BIY1 525 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Crb1Q8VHS2 1405 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Mctp1E9PV86 951 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Tyro3P55144 880 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Csrnp1P59054 583 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Bach2P97303 839 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ccdc129Q14B48 1034 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Snx13Q6PHS6 957 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Acsbg1Q99PU5 721 aa10.93□□□□□ -0.66
Usp28-201ENSMUST00000047349 Usp42B2RQC2 1324 aaKnown RBP10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Trim34bJ3QNR8 485 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 NpeppsQ11011 920 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 ZyxQ62523 564 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Spty2d1Q68FG3 682 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Jmjd4Q8BFT6 427 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Add3Q9QYB5 706 aaKnown RBP10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ctdnep1Q3TP92 244 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Mmel1Q9JLI3 765 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ccdc112A0AUP1 442 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Exosc10P56960 887 aaKnown RBP10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Rbm17Q8JZX4 405 aaKnown RBP10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ccer1Q9CQL2 403 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ccdc47Q9D024 483 aaKnown RBP10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Odf2lQ9D478 642 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Appbp2Q9DAX9 585 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cdc45Q9Z1X9 566 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Carmil3Q3UFQ8 1375 aa10.92□□□□□ -0.66
Usp28-201ENSMUST00000047349 Prr29B1ARI9 187 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cyp3a57D3YYZ0 503 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ftl2P49945 183 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Atp2b3Q0VF55 1220 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cep63Q3UPP8 700 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ubash3aQ3V3E1 624 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ltv1Q6NSQ7 470 aaKnown RBP10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Rtn4Q99P72 1162 aaKnown RBP10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Scn4aQ9ER60 1841 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Kcnh4A2A5F7 1018 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 RdxP26043 583 aaKnown RBP10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 LyarQ08288 388 aaKnown RBP10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Pank2Q3U4S0 443 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 BcanQ61361 883 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Clca2Q8BG22 942 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 E4f1Q8CCE9 783 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Fbxo3Q9DC63 480 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Hook1Q8BIL5 728 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Amigo3Q8C2S7 508 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Lmbrd2Q8C561 694 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Wdr19Q3UGF1 1341 aa10.91□□□□□ -0.66
Usp28-201ENSMUST00000047349 Gzf1Q4VBD9 706 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Plcd3Q8K2J0 785 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Nip7Q9CXK8 180 aaKnown RBP10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cap2Q9CYT6 476 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Ank1Q02357 1862 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cep55Q8BT07 462 aa10.9□□□□□ -0.66
Usp28-201ENSMUST00000047349 Cavin1O54724 392 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms