RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Trak2Q6P9N8 913 aa21.08■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Skor1Q8BX46 964 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Stk36Q69ZM6 1316 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 NpcdF8VQB8 469 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ranbp1P34022 203 aaKnown RBP21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Capza3P70190 299 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ssrp1Q08943 708 aaKnown RBP21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ppp1r21Q3TDD9 780 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Map3k11Q80XI6 850 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Lmbrd2Q8C561 694 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Frat2Q8K025 231 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Osbpl5Q9ER64 874 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Kdm3aQ6PCM1 1323 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 FanccP50652 591 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Zscan22Q8BGS5 496 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Plekho1Q9JIY0 408 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Vps37dQ810I0 261 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Lmod1Q8BVA4 595 aa21.07■□□□□ 0.96
Ebf3-201ENSMUST00000033378 IqcgQ80W32 419 aa21.06■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Tmem132aQ922P8 1018 aa21.06■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Myo1bP46735 1107 aa21.06■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Usp19Q3UJD6 1360 aa21.06■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Zfp853A0A1D5RM95 733 aa21.05■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Nphp4P59240 1425 aa21.05■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Tbc1d5Q80XQ2 815 aa21.05■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Jmjd4Q8BFT6 427 aa21.05■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Slf2Q6P9P0 1278 aa21.05■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Snap23O09044 210 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 NsmfQ99NF2 532 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ttc41Q692V3 1318 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 EspnlQ3UYR4 1005 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Atp1a3Q6PIC6 1013 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Pkd2l2Q9JLG4 621 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Map3k19E9Q3S4 1311 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Aox1O54754 1333 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Edc4Q3UJB9 1406 aaKnown RBP21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Rrp1P56183 494 aaKnown RBP21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Cnnm2Q3TWN3 875 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Lman1Q9D0F3 517 aa21.04■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ranbp6Q8BIV3 1105 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Antxr1Q9CZ52 562 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Ccdc42Q5SV66 316 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Kank4Q6P9J5 1016 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Asxl2Q8BZ32 1370 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Tubb4bP68372 445 aaKnown RBP21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Clul1Q3ZRW6 464 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Iffo1Q8BXL9 562 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Q9D5Q8 446 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Dzip1Q8BMD2 852 aa21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Scaf11E9PZM7 1456 aaKnown RBP21.03■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Rbm17Q8JZX4 405 aaKnown RBP21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Exoc1Q8R3S6 894 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Uso1Q9Z1Z0 959 aaKnown RBP21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Tmem94Q7TSH8 1360 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Setdb1O88974 1307 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Izumo3A6PWV3 263 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Slc4a4O88343 1079 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Sh3bp1P55194 680 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 ClasrpQ8CFC7 668 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Znf287Q9EQB9 759 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Igf2bp2Q5SF07 592 aaKnown RBP21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 SdsQ8VBT2 327 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Calml4Q91WQ9 153 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 LratQ9JI60 231 aa21.02■□□□□ 0.96
Ebf3-201ENSMUST00000033378 Kiaa1107Q80TK0 1369 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Nap1l2P51860 460 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Atp1a2Q6PIE5 1020 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ttc12Q8BW49 704 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Q8BZJ8 459 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Acsbg1Q99PU5 721 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Yeats4Q9CR11 227 aaKnown RBP21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Smc1aQ9CU62 1233 aaKnown RBP21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 ParvgQ9ERD8 331 aa21.02■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Speer4aF8VPX6 267 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Skint5A7XUY5 1461 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Lrrc7Q80TE7 1490 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Fam186bD3Z420 943 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Rassf4Q8CB96 322 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Lrrc2Q8VDB8 371 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Pex1Q5BL07 1284 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Wdr24Q8CFJ9 790 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Edc3Q8K2D3 508 aaKnown RBP21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Matr3Q8K310 846 aaKnown RBP21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ctage5Q8R311 779 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Efcab2Q9CQ46 164 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Lonp2Q9DBN5 852 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Dnajc10Q9DC23 793 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Col4a3bpQ9EQG9 624 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Timm10P62073 90 aa21.01■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Gm28919A0A087WP35 240 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Rtn1Q8K0T0 780 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Pde3aQ9Z0X4 1141 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Ube3aO08759 870 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Tubb5P99024 444 aaKnown RBP21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Cdan1Q8CC12 1239 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Cfap53Q9D439 514 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Prpf40aQ9R1C7 953 aaKnown RBP21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 AatkQ80YE4 1365 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Dennd3A2RT67 1274 aa21■□□□□ 0.95
Ebf3-201ENSMUST00000033378 Zfpm1O35615 995 aa21■□□□□ 0.95
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms