RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 L3HYPDHQ96EM0 354 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 PANX2Q96RD6 677 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 TMEM43Q9BTV4 400 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 TRIM62Q9BVG3 475 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 UBE2ZQ9H832 354 aaPredicted RBP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 SGK1O00141 431 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ERLIN2O94905 339 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 UTS2O95399 124 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 RAB3DO95716 219 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 IGKV4-1P06312 121 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CDKN2BP42772 138 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 LRRC74AQ0VAA2 488 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 TCP10Q12799 353 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF77Q15935 545 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CCDC152Q4G0S7 254 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 KDM7AQ6ZMT4 941 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CCDC73Q6ZRK6 1079 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 RGS9BPQ6ZS82 235 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 SLC25A48Q6ZT89 311 aaKnown RBP2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 LGI3Q8N145 548 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 SHC3Q92529 594 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CNDP1Q96KN2 507 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CFAP53Q96M91 514 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF382Q96SR6 550 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 DOK1Q99704 481 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 FOXC2Q99958 501 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ZSCAN5AQ9BUG6 496 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 TMEM59Q9BXS4 323 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 CHMP4BQ9H444 224 aaKnown RBP2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ANKRD19PQ9H560 264 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 RPF2Q9H7B2 306 aaKnown RBP2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 HPCAL4Q9UM19 191 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 PIGLQ9Y2B2 252 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 S4R3C0 116 aa2.43□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF233A6NK53 670 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 SOX15O60248 233 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 KLHL41O60662 606 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 CCNKO75909 580 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 C1orf105O95561 183 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 TSPAN12O95859 305 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 GNAO1P09471 354 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 EPS15P42566 896 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 IFNAR2P48551 515 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 HNMTP50135 292 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 TEX43Q6ZNM6 134 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 LRRC74BQ6ZQY2 392 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 RNF139Q8WU17 664 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 STMN2Q93045 179 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 FAM3DQ96BQ1 224 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 PLEKHA8Q96JA3 519 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF681Q96N22 645 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 RNF5Q99942 180 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 ERP44Q9BS26 406 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 CRACR2AQ9BSW2 395 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 TCHPQ9BT92 498 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 SLC25A2Q9BXI2 301 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 PEX16Q9Y5Y5 336 aa2.42□□□□□ -2.02
SCAMP1-205ENST00000614488 PCP4L1A6NKN8 68 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 SNTNA6NMZ2 147 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 BOLA2-SMG1P6H3BVE0 249 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 TIMM8AO60220 97 aaPredicted RBP2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 GMFGO60234 142 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 C1GALT1C1LP0DN25 315 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 SULT1E1P49888 294 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 CDH4P55283 916 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 CDC20Q12834 499 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 IGFBP7Q16270 282 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 CEP55Q53EZ4 464 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 CCDC183Q5T5S1 534 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 EFL1Q7Z2Z2 1120 aaKnown RBP2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 OAFQ86UD1 273 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 LRRC75A-AS1Q8N1F1 130 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 NECAP1Q8NC96 275 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 IFT74Q96LB3 600 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 CTNNA3Q9UI47 895 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 MRPS18BQ9Y676 258 aaKnown RBP2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 ADAMTS13Q76LX8 1427 aa2.41□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF850A8MQ14 1090 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 A8MUU9 505 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 UBXN8O00124 270 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 AP3B1O00203 1094 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 OR56A5P0C7T3 313 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 CALM1P0DP23 149 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 CALM2P0DP24 149 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 CALM3P0DP25 149 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 CASQ1P31415 396 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 MAB21L1Q13394 359 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 IRF4Q15306 451 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 CEMP1Q6PRD7 247 aaPredicted RBP2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 ASCL5Q7RTU5 278 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 PSTKQ8IV42 348 aaKnown RBP2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 C15orf40Q8WUR7 153 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 RBMXL1Q96E39 390 aaKnown RBP2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 PIK3IP1Q96FE7 263 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 SLC41A3Q96GZ6 507 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 TCEANC2Q96MN5 208 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 SAV1Q9H4B6 383 aaPredicted RBP2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 UVRAGQ9P2Y5 699 aa2.4□□□□□ -2.03
SCAMP1-205ENST00000614488 YEATS2Q9ULM3 1422 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms