RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 NSMAFQ92636 917 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 HTRA1Q92743 480 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 RASD2Q96D21 266 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 CADM1Q9BY67 442 aaKnown RBP12.53□□□□□ -0.4
MKS1-207ENST00000578789 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 SIAEQ9HAT2 523 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 CA10Q9NS85 328 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 VNN3Q9NY84 501 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 MED13LQ71F56 2210 aa12.53□□□□□ -0.4
MKS1-207ENST00000578789 DHRS12A0PJE2 317 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 SLC22A23A1A5C7 686 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 PRSS37A4D1T9 235 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 H7C1C5 153 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 XKRYO14609 159 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 ATP5HO75947 161 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 CCNB2O95067 398 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 SERPINA5P05154 406 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 MMP7P09237 267 aaPredicted RBP12.52□□□□□ -0.41
MKS1-207ENST00000578789 PATE4P0C8F1 98 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 ZNF35P13682 527 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 CDAP32320 146 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 CDKN1AP38936 164 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 RPS6KA3P51812 740 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 ATP5J2P56134 94 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 LCN6P62502 163 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 GK3PQ14409 553 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 RAB39AQ14964 217 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 RFX4Q33E94 735 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 TMEM53Q6P2H8 277 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 YTHDF3Q7Z739 585 aaKnown RBP12.52□□□□□ -0.41
MKS1-207ENST00000578789 ADCK1Q86TW2 530 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 OR9Q2Q8NGE9 314 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 GTPBP3Q969Y2 492 aaKnown RBP12.52□□□□□ -0.41
MKS1-207ENST00000578789 TRMT61AQ96FX7 289 aaKnown RBP12.52□□□□□ -0.41
MKS1-207ENST00000578789 ZNF442Q9H7R0 627 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 REEP1Q9H902 201 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 DLL4Q9NR61 685 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 VSX1Q9NZR4 365 aaPredicted RBP12.52□□□□□ -0.41
MKS1-207ENST00000578789 IL20RAQ9UHF4 553 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 POMPQ9Y244 141 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 IER3IP1Q9Y5U9 82 aa12.52□□□□□ -0.41
MKS1-207ENST00000578789 TCRBV3S1A0A5B6 114 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 IMPA2O14732 288 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 ARPC3O15145 178 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 GSC2O15499 205 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 SLC6A6P31641 620 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 RASSF2P50749 326 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 FLOT2Q14254 428 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 ADIPOQQ15848 244 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 ETFDHQ16134 617 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 FAM27BQ5VT28 67 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 RPL13AP3Q6NVV1 102 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 CANT1Q8WVQ1 401 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 SNX18Q96RF0 628 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 CHID1Q9BWS9 393 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 CACNG6Q9BXT2 260 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 SLC7A8Q9UHI5 535 aa12.51□□□□□ -0.41
MKS1-207ENST00000578789 SAMHD1Q9Y3Z3 626 aaKnown RBP12.51□□□□□ -0.41
MKS1-207ENST00000578789 H7C417 338 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 SOCS2O14508 198 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 PPP1R3DO95685 299 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 IGHV4-39P01824 125 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 CST2P09228 141 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 CD99P14209 185 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 CTLA4P16410 223 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 NR4A1P22736 598 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 DAG1Q14118 895 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 EFNB3Q15768 340 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 MICAQ29983 383 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 MST1LQ2TV78 715 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 PTCHD4Q6ZW05 846 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 LRRC18Q8N456 261 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 KCNN2Q9H2S1 579 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 RNF121Q9H920 327 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 POLE4Q9NR33 117 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 CDH10Q9Y6N8 788 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 ARFGEF3Q5TH69 2177 aa12.5□□□□□ -0.41
MKS1-207ENST00000578789 FLNAP21333 2647 aaKnown RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 A0A1W2PPL8 197 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 ARRDC5A6NEK1 342 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 PTHP01270 115 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 ZNF32P17041 273 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 MSR1P21757 451 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 THBS4P35443 961 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 SERPINF1P36955 418 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 PPP1R8Q12972 351 aaKnown RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 SNTB2Q13425 540 aaKnown RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 ENDOGQ14249 297 aaKnown RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 SGCAQ16586 387 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 KRT80Q6KB66 452 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 RASSF6Q6ZTQ3 369 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 SPATA24Q86W54 205 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 AQP11Q8NBQ7 271 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 PAPD5Q8NDF8 572 aaKnown RBP12.49□□□□□ -0.41
MKS1-207ENST00000578789 SLC30A7Q8NEW0 376 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 FBXO17Q96EF6 278 aa12.49□□□□□ -0.41
MKS1-207ENST00000578789 SAMD8Q96LT4 415 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms