RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 ANGPTL5Q86XS5 388 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 OR5M11Q96RB7 305 aa15.83■□□□□ 0.13
SHANK1-201ENST00000293441 TMPRSS11DO60235 418 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 HCCSP53701 268 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 MRPS34P82930 218 aaKnown RBP15.83■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF419Q96HQ0 510 aaPredicted RBP15.83■□□□□ 0.12
SHANK1-201ENST00000293441 TMEM30AQ9NV96 361 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 LOC100289279A0A1B0GTE1 492 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 C1orf196B1AJZ1 125 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 RGS11O94810 467 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 SELEP16581 610 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 SRMP19623 302 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 PHLDA2Q53GA4 152 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 FAM3DQ96BQ1 224 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 ARSGQ96EG1 525 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 BANF2Q9H503 90 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 C19orf12Q9NSK7 152 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 NECAP2Q9NVZ3 263 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 ATPIF1Q9UII2 106 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 GPR55Q9Y2T6 319 aaPredicted RBP15.83■□□□□ 0.12
SHANK1-201ENST00000293441 CALCBP10092 127 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 NID1P14543 1247 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 NKX6-1P78426 367 aaPredicted RBP15.83■□□□□ 0.12
SHANK1-201ENST00000293441 PLA2G7Q13093 441 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 CD300LGQ6UXG3 332 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 OVCH1Q7RTY7 1134 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 FUNDC1Q8IVP5 155 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 BCKDHBP21953 392 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 CORO6Q6QEF8 472 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 Q6ZNB5 142 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 MUTYHQ9UIF7 546 aa15.83■□□□□ 0.12
SHANK1-201ENST00000293441 A0A0B4J2A0 478 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 ANXA7P20073 488 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 FKBP2P26885 142 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 CPEB3Q8NE35 698 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 INTS12Q96CB8 462 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 SHPKQ9UHJ6 478 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 HYAL1Q12794 435 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 KCTD12Q96CX2 325 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 OR11A1Q9GZK7 315 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 OR52A5Q9H2C5 316 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 C4orf47A7E2U8 309 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 GPX2P18283 190 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 RPS23P62266 143 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 GNB1P62873 340 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 HLA-BQ31612 363 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 OTUD1Q5VV17 481 aaPredicted RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 MED18Q9BUE0 208 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 CLEC2DQ9UHP7 191 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 RAB22AQ9UL26 194 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 C5orf49A4QMS7 147 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 H7C1Q1 480 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 SLC16A6O15403 523 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 CLN5O75503 358 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 PAPLNO95428 1278 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 CLEC3BP05452 202 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 ZDHHC11BP0C7U3 371 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 ADGRE4PQ86SQ3 457 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 NKAIN3Q8N8D7 197 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 LYSMD1Q96S90 227 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 A6NHS1 94 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF133P52736 654 aaPredicted RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 OR2M2Q96R28 347 aa15.82■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF346Q9UL40 294 aaKnown RBP15.82■□□□□ 0.12
SHANK1-201ENST00000293441 MYH14Q7Z406 1995 aaKnown RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 NOVA1P51513 510 aaKnown RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 OR51D1Q8NGF3 324 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 LIN37Q96GY3 246 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 LUZP4Q9P127 313 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 MKRN2OSH3BPM6 223 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 GNB2P62879 340 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 NHSL2Q5HYW2 709 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ANKRD16Q6P6B7 361 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 TRILQ7L0X0 811 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 SLC43A2Q8N370 569 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 EXD3Q8N9H8 876 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 SLC5A6Q9Y289 635 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 DOCK2Q92608 1830 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ACSM1Q08AH1 577 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF385BQ569K4 471 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 SAT2Q96F10 170 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 METTL17Q9H7H0 456 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ASIC5Q9NY37 505 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 NDRG4Q9ULP0 352 aaKnown RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 PMS2P1A4D2B8 440 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 BTBD17A6NE02 478 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 IGLV3-25P01717 112 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF486Q96H40 463 aaPredicted RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 GPATCH2Q9NW75 528 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 STMND1H3BQB6 276 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 MRPL19P49406 292 aaKnown RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF74Q16587 644 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 STEAP1BQ6NZ63 245 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.81■□□□□ 0.12
SHANK1-201ENST00000293441 SLC35G3Q8N808 338 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 C16orf52Q8NHV5 167 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 SARAFQ96BY9 339 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 PDCD1LG2Q9BQ51 273 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ETV7Q9Y603 341 aa15.81■□□□□ 0.12
SHANK1-201ENST00000293441 ZNF705FA8MVS1 300 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms