RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 UPB1Q9UBR1 384 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 GPR52Q9Y2T5 361 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 CACNA1CQ13936 2221 aa17.49■□□□□ 0.39
PDLIM2-221ENST00000622702 SETXQ7Z333 2677 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 ADGRG4Q8IZF6 3080 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 RPL36A-HNRNPH2H7BZ11 118 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 M0R129 80 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 TLX2O43763 284 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 QDPRP09417 244 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 PAICSP22234 425 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 GRNP28799 593 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 STK11Q15831 433 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 C10orf128Q5T292 105 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 Q6ZT83 130 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 LINGO2Q7L985 606 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 ABHD12BQ7Z5M8 362 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF610Q8N9Z0 462 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 PTP4A1Q93096 173 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 NUAK2Q9H093 628 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 OPN3Q9H1Y3 402 aaPredicted RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 HINT3Q9NQE9 182 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 RPRD1BQ9NQG5 326 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF226Q9NYT6 803 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 RAB26Q9ULW5 256 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 FKBP7Q9Y680 259 aa17.48■□□□□ 0.39
PDLIM2-221ENST00000622702 A8MXE2 369 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF587BE7ETH6 402 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 PRR23D1E9PI22 279 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 MPZL2O60487 215 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 KRT33AO76009 404 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CLIC3O95833 236 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 GNAO1P09471 354 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 PRR23D2P0DMB1 279 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CTLA4P16410 223 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CRABP1P29762 137 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 SNRPGP62308 76 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 FMODQ06828 376 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC25A35Q3KQZ1 300 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 HIST2H2BCQ6DN03 193 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC25A47Q6Q0C1 308 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 BEND4Q6ZU67 534 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 ZBTB46Q86UZ6 589 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CPOQ8IVL8 374 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 OR6V1Q8N148 313 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 GABRG1Q8N1C3 465 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 UBE2J2Q8N2K1 259 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 SETD9Q8NE22 299 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 OR2T4Q8NH00 348 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 UBE2FQ969M7 185 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 MUS81Q96NY9 551 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 IL4I1Q96RQ9 567 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CRLF2Q9HC73 371 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 GPR35Q9HC97 309 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 HSPE1-MOB4S4R3N1 261 aa17.47■□□□□ 0.39
PDLIM2-221ENST00000622702 CRYBG3Q68DQ2 2970 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 IGKV1D-43A0A0B4J1Z2 117 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 FAM183AA6NL82 134 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 DHHO43323 396 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 GABRB1P18505 474 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 ROR2Q01974 943 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 FAPQ12884 760 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 SLC25A30Q5SVS4 291 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 PLBD1Q6P4A8 553 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 DNM1P34Q6PK57 102 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 ZNF474Q6S9Z5 364 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 CXXC5Q7LFL8 322 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 ENTHD1Q8IYW4 607 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 RHOXF1Q8NHV9 184 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 TSSK2Q96PF2 358 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 HCAR1Q9BXC0 346 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 ANKRD60Q9BZ19 345 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 RACGAP1Q9H0H5 632 aa17.46■□□□□ 0.39
PDLIM2-221ENST00000622702 IGLV1-36A0A0B4J1U3 117 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 EEF1E1-BLOC1S5C9J1V9 151 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 C19orf84I3L1E1 186 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 DCTN6O00399 190 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 EEF1E1O43324 174 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 SLC16A7O60669 478 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 MPGP29372 298 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 ISL1P61371 349 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 AADACL4Q5VUY2 407 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 SP5Q6BEB4 398 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 C8orf59Q8N0T1 100 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 OR9Q1Q8NGQ5 310 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 SRA1Q9HD15 236 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 B9D1Q9UPM9 204 aa17.45■□□□□ 0.38
PDLIM2-221ENST00000622702 PRODHO43272 600 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 KHDRBS3O75525 346 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 SPI1P17947 270 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 COX5AP20674 150 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 P2RY6Q15077 328 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 CEACAM16Q2WEN9 425 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 NXNL2Q5VZ03 156 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 LUZP2Q86TE4 346 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 ZNF837Q96EG3 531 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 MED20Q9H944 212 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 TAS2R16Q9NYV7 291 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 UGT2A1Q9Y4X1 527 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 HCFC1P51610 2035 aa17.44■□□□□ 0.38
PDLIM2-221ENST00000622702 ITGA5P08648 1049 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms