RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CEP112Q8N8E3 955 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 GMCL1P1Q8NEA9 526 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 OR5D13Q8NGL4 314 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 C10orf35Q96D05 121 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 MED8Q96G25 268 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 HSFY1Q96LI6 401 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 PPA2Q9H2U2 334 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 C12orf10Q9HB07 376 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 CGNQ9P2M7 1197 aaKnown RBP2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 ADAM28Q9UKQ2 775 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 SYNRGQ9UMZ2 1314 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 ATAD2BQ9ULI0 1458 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 IGLV1-50A0A075B6I6 118 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 IGLV3-12A0A075B6K2 115 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 C2P06681 752 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 VHLP40337 213 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 PEX19P40855 299 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 ARG2P78540 354 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 OGDHQ02218 1023 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 ZNF92Q03936 586 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 FGL1Q08830 312 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 MRPL28Q13084 256 aaKnown RBP2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 SF3A2Q15428 464 aaKnown RBP2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 KDELC1Q6UW63 502 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 NOXO1Q8NFA2 376 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 TMEM54Q969K7 222 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 TRIM44Q96DX7 344 aaPredicted RBP2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 RNF157Q96PX1 679 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 RARRES2Q99969 163 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 NMRAL1Q9HBL8 299 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 POLE4Q9NR33 117 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 CDH9Q9ULB4 789 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 PSG8Q9UQ74 426 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 IKBKGQ9Y6K9 419 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 PTPRTO14522 1441 aa2.47□□□□□ -2.01
SCAMP1-205ENST00000614488 CCL21O00585 134 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 RAD51BO15315 384 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 GABARAPO95166 117 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 SERPINB5P36952 375 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 SSR1P43307 286 aaKnown RBP2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 PDK3Q15120 406 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 MAJINQ3KP22 176 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 NCCRP1Q6ZVX7 275 aaPredicted RBP2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 PPP1R42Q7Z4L9 355 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 LHFPL3Q86UP9 236 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 OTUD6BQ8N6M0 293 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 OR2G2Q8NGZ5 317 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 SCFD1Q8WVM8 642 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF606Q8WXB4 792 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 CREB3L1Q96BA8 519 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 TM4SF18Q96CE8 201 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 SH3GL1Q99961 368 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 PTBP2Q9UKA9 531 aaKnown RBP2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 KIAA1257Q9ULG3 409 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 DOCK8Q8NF50 2099 aa2.46□□□□□ -2.02
SCAMP1-205ENST00000614488 SYNJ2BP-COX16A0A087WUM0 186 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF207O43670 478 aaKnown RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 SNNO75324 88 aaPredicted RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 RP2O75695 350 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 FABP3P05413 133 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 BCHEP06276 602 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 NCK1P16333 377 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 ATP5C1P36542 298 aaKnown RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 TNNT2P45379 298 aaPredicted RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 CSNK1A1P48729 337 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 IRX3P78415 501 aaPredicted RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 CFAP157Q5JU67 520 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 ATAD3BQ5T9A4 648 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 CALHM3Q86XJ0 350 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 STEAP2Q8NFT2 490 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 ABHD3Q8WU67 409 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 NARS2Q96I59 477 aaKnown RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 PSKH2Q96QS6 385 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 CNN2Q99439 309 aaKnown RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 P2RX4Q99571 388 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 SYNDIG1Q9H7V2 258 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 GPATCH2LQ9NWQ4 482 aa2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 GPATCH8Q9UKJ3 1502 aaKnown RBP2.45□□□□□ -2.02
SCAMP1-205ENST00000614488 ERICH4A6NGS2 130 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 HIDE1A8MVS5 230 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 EIF3GO75821 320 aaKnown RBP eCLIP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 SNX4O95219 450 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 HLA-DPB1P04440 258 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 PBLDP30039 288 aaPredicted RBP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 HRH1P35367 487 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 PRPHP41219 470 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 MAGEA8P43361 318 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 RFX3P48380 749 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 CX3CR1P49238 355 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 RORCP51449 518 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 ARFIP1P53367 373 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 FBXW4P57775 412 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 ZNF816Q0VGE8 651 aaPredicted RBP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 RABL6Q3YEC7 729 aaPredicted RBP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 FAM78AQ5JUQ0 283 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 HDDC2Q7Z4H3 204 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 MMAAQ8IVH4 418 aaKnown RBP2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 OSR2Q8N2R0 312 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 GATSQ8NAP1 163 aa2.44□□□□□ -2.02
SCAMP1-205ENST00000614488 FAM110BQ8TC76 370 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms