RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ZNF100Q8IYN0 542 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 FAM184AQ8NB25 1140 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR10G3Q8NGC4 313 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR51S1Q8NGJ8 323 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF564Q8TBZ8 553 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 MRAPQ8TCY5 172 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIFAP3Q92845 792 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 EBF4Q9BQW3 602 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 NAT9Q9BTE0 207 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 IQCGQ9H095 443 aaKnown RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZDHHC11Q9H8X9 412 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 MARCH5Q9NX47 278 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 CD274Q9NZQ7 290 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 THSD7BQ9C0I4 1608 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 PHLPP2Q6ZVD8 1323 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 PCDH11XQ9BZA7 1347 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 AFDNP55196 1824 aaKnown RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ARFGEF1Q9Y6D6 1849 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 PALLDQ8WX93 1383 aa3.9□□□□□ -1.78
HMGB1P3-201ENST00000502802 IGLV3-22A0A075B6J6 115 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 DYNC1I1O14576 645 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 TSPAN13O95857 204 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 HSPB1P04792 205 aaKnown RBP3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 RALBP11234 206 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 PSMB1P20618 241 aaKnown RBP3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 SLC2A5P22732 501 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 CMA1P23946 247 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 RRM2P31350 389 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 NAA10P41227 235 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 NSG1P42857 185 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 TFPI2P48307 235 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 TGFBR3Q03167 851 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF763Q0D2J5 394 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 C1orf100Q5SVJ3 147 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 C1orf94Q6P1W5 598 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 TMEM53Q6P2H8 277 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF836Q6ZNA1 936 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 Q6ZSR3 168 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 SMIM5Q71RC9 77 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF546Q86UE3 836 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 MS4A15Q8N5U1 240 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 OR2G2Q8NGZ5 317 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 PIBF1Q8WXW3 757 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 SMARCD2Q92925 531 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 CCDC126Q96EE4 140 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ATP5SQ99766 215 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ARHGDIGQ99819 225 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 NICN1Q9BSH3 213 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 ADAP2Q9NPF8 381 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 IL26Q9NPH9 171 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 RPRD1BQ9NQG5 326 aaKnown RBP3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 VNN3Q9NY84 501 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 CLEC4EQ9ULY5 219 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 PACSIN2Q9UNF0 486 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 TJP1Q07157 1748 aa3.9□□□□□ -1.79
HMGB1P3-201ENST00000502802 FAM168BA1KXE4 195 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 LRRIQ3A6PVS8 624 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 SPECC1L-ADORA2AF8WAN1 911 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 AIM2O14862 343 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 RAB29O14966 203 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 MGRN1O60291 552 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ZNF780AO75290 641 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ERCC1P07992 297 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ANXA5P08758 320 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 MAGEA1P43355 309 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 RFX3P48380 749 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 CCNHP51946 323 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 RIPPLY3P57055 190 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 RAB10P61026 200 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ATP6AP1Q15904 470 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 C9orf135Q5VTT2 229 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 CCDC73Q6ZRK6 1079 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 TMEM179BQ7Z7N9 219 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 KATNAL2Q8IYT4 538 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 GABRG1Q8N1C3 465 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 GPD1LQ8N335 351 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 CD177Q8N6Q3 437 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 NKAPP1Q8N9T2 125 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 OR4A4PQ8NGN8 299 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 FAM122AQ96E09 287 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 TSG101Q99816 390 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 KCTD14Q9BQ13 255 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 PELOQ9BRX2 385 aaKnown RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 POLR2J2Q9GZM3 115 aaKnown RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 POLR2J3Q9H1A7 115 aaKnown RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 MRPL47Q9HD33 250 aaKnown RBP3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 SH2D2AQ9NP31 389 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 AIG1Q9NVV5 245 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ASF1AQ9Y294 204 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 ADAMTS7Q9UKP4 1686 aa3.89□□□□□ -1.79
HMGB1P3-201ENST00000502802 CICQ96RK0 1608 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 CACNA1SQ13698 1873 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 A0A1B0GTQ1 180 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 RBMY1BA6NDE4 496 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 RBMY1EA6NEQ0 496 aaKnown RBP3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 SUPT3HB4E1H0 165 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 PPP1R2P9O14990 202 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 AGPAT2O15120 278 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 GAS8-AS1O95177 125 aa3.88□□□□□ -1.79
HMGB1P3-201ENST00000502802 TIMP1P01033 207 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms