RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 FMODQ06828 376 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 STPG1Q5TH74 334 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 FAM131AQ6UXB0 335 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 UNQ9370/PRO34162Q6UXP9 181 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 NHLRC1Q6VVB1 395 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 HDDC2Q7Z4H3 204 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 NR2C2APQ86WQ0 139 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 ZNF454Q8N9F8 522 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 DEFB124Q8NES8 71 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 NSMAFQ92636 917 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 RBP7Q96R05 134 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 OR14A2Q96R54 314 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 OR8B4Q96RC9 309 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 SDHCQ99643 169 aaPredicted RBP16.96■□□□□ 0.31
USP39-202ENST00000409025 EMC6Q9BV81 110 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 SLCO1C1Q9NYB5 712 aa16.96■□□□□ 0.31
USP39-202ENST00000409025 OR2M5A3KFT3 312 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 FABP12A6NFH5 140 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 AQP7P3A6NL99 342 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 ZFPL1O95159 310 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 ZNF823P16415 610 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 PTGS2P35354 604 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 LRRC69Q6ZNQ3 347 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 GPAT4Q86UL3 456 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 WDFY1Q8IWB7 410 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 OR5AK2Q8NH90 309 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 HSD17B8Q92506 261 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 KCTD12Q96CX2 325 aaKnown RBP16.96■□□□□ 0.3
USP39-202ENST00000409025 AMELYQ99218 206 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 PIGQQ9BRB3 760 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 TBCCD1Q9NVR7 557 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 STMN3Q9NZ72 180 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 TEKT2Q9UIF3 430 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 ADAM30Q9UKF2 790 aa16.96■□□□□ 0.3
USP39-202ENST00000409025 ALPK2Q86TB3 2170 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 A0A1W2PPK0 400 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 ZNF879B4DU55 563 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 HPGDSO60760 199 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 PFDN1O60925 122 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 RAB3BP20337 219 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 TGM1P22735 817 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 SRD5A2P31213 254 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 OC90Q02509 493 aaPredicted RBP16.95■□□□□ 0.3
USP39-202ENST00000409025 EIF2B1Q14232 305 aaKnown RBP16.95■□□□□ 0.3
USP39-202ENST00000409025 TOMM20Q15388 145 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 MEP1BQ16820 701 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 OTPQ5XKR4 325 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
USP39-202ENST00000409025 SLC22A16Q86VW1 577 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 SLC26A10Q8NG04 563 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 ADAMTS17Q8TE56 1095 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 MAP6Q96JE9 813 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 FRRS1LQ9P0K9 344 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 KLHL13Q9P2N7 655 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 ZNF318Q5VUA4 2279 aa16.95■□□□□ 0.3
USP39-202ENST00000409025 ZNF43P17038 809 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 SLC17A1Q14916 467 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 ZNF79Q15937 498 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 HSD17B12Q53GQ0 312 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 SFXN4Q6P4A7 337 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 XKRXQ6PP77 449 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 ZNF679Q8IYX0 411 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 OR8H2Q8N162 312 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 POC5Q8NA72 575 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 SRRQ9GZT4 340 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 ELOVL3Q9HB03 270 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 POLE4Q9NR33 117 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 PCNX2A6NKB5 2137 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 A0A0G2JMM0 328 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 LOC102725191A0A1B0GVB3 256 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 A0A1W2PPB8 328 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 A0A1W2PRS3 328 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 KIR3DP1A8MWS1 328 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 ZNF814B7Z6K7 855 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 TRAF3IP2O43734 574 aaPredicted RBP16.94■□□□□ 0.3
USP39-202ENST00000409025 SLC19A2O60779 497 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 MPZL1O95297 269 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 IGHG1P01857 330 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 OR10A3P58181 314 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 CLRN1P58418 232 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 DEFA1P59665 94 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 DEFA3P59666 94 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 RAC1P63000 192 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 THEM4Q5T1C6 240 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 LRRN1Q6UXK5 716 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 KRT77Q7Z794 578 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 OR2G2Q8NGZ5 317 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 SLC25A44Q96H78 314 aaPredicted RBP16.94■□□□□ 0.3
USP39-202ENST00000409025 MRPL13Q9BYD1 178 aaKnown RBP16.94■□□□□ 0.3
USP39-202ENST00000409025 COMMD4Q9H0A8 199 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 KLHL9Q9P2J3 617 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 RASD1Q9Y272 281 aa16.94■□□□□ 0.3
USP39-202ENST00000409025 A0A0G2JK05 382 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 GJE1A6NN92 205 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 EIF1BO60739 113 aaKnown RBP16.93■□□□□ 0.3
USP39-202ENST00000409025 FTH1P19P0C7X4 201 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 PSMD7P51665 324 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 ROM1Q03395 351 aa16.93■□□□□ 0.3
USP39-202ENST00000409025 RASGEF1BQ0VAM2 473 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms