RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TRIM69Q86WT6 500 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 SORT1Q99523 831 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 SH3GL3Q99963 347 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 ANP32EQ9BTT0 268 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 NIPAL2Q9H841 368 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 DCAF16Q9NXF7 216 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 SH3BGRL2Q9UJC5 107 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 MSH6P52701 1360 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 CENPJQ9HC77 1338 aaPredicted RBP2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 IGHV3-74A0A0B4J1X5 117 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 IGHV5-10-1A0A0J9YXX1 117 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 RBFOX2O43251 390 aaKnown RBP eCLIP2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 FCMRO60667 390 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 SLC25A14O95258 325 aaPredicted RBP2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 MPZL1O95297 269 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ADRA2AP08913 450 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 POLR2MP0CAP2 368 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 PRPS2P11908 318 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 FOLR1P15328 257 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 SLC2A5P22732 501 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 NAMPTP43490 491 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 CCT3P49368 545 aaKnown RBP2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 UGT2B15P54855 530 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 PRPSAP1Q14558 356 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 DNLZQ5SXM8 178 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ENPP6Q6UWR7 440 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ZNF493Q6ZR52 646 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 WDR86Q86TI4 376 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 OR2T3Q8NH03 318 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ESR2Q92731 530 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 MS4A4EQ96PG1 132 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 OR8B4Q96RC9 309 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 MRPL37Q9BZE1 423 aaKnown RBP2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 SPNS1Q9H2V7 528 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 SHPKQ9UHJ6 478 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ATP6V0A2Q9Y487 856 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 AP1M2Q9Y6Q5 423 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 ATP10AO60312 1499 aa2.51□□□□□ -2.01
SCAMP1-205ENST00000614488 CIB4A0PJX0 185 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 OR7A10O76100 309 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 RHOBTB1O94844 696 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 IGHV2-5P01817 119 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 TCN2P20062 427 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 HSD17B2P37059 387 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 CACNG7P62955 275 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 ARHGAP19Q14CB8 494 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 EXOC3L2Q2M3D2 409 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 PDZK1Q5T2W1 519 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 ABHD13Q7L211 337 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 FAM83FQ8NEG4 500 aaPredicted RBP2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 OR52P1PQ8NH57 321 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 TTC25Q96NG3 672 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 COPS8Q99627 209 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 MCCC2Q9HCC0 563 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 HMG20AQ9NP66 347 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 ISYNA1Q9NPH2 558 aa2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 COL27A1Q8IZC6 1860 aaPredicted RBP2.5□□□□□ -2.01
SCAMP1-205ENST00000614488 CDHR2Q9BYE9 1310 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 TRAV39A0A0B4J263 110 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 ZNF726A6NNF4 738 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RPL36A-HNRNPH2H7BZ11 118 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 KMOO15229 486 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 MAGEB3O15480 346 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RRP8O43159 456 aaKnown RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 LINC00869P0C866 280 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RNASE2P10153 161 aaKnown RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 ATP1B3P54709 279 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 HMGN5P82970 282 aaKnown RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 PON3Q15166 354 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 SLC25A24Q6NUK1 477 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 NTM-AS1Q6ZSK4 140 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 TMEM179Q6ZVK1 233 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 TMEM135Q86UB9 458 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RIMKLAQ8IXN7 391 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 TBC1D21Q8IYX1 336 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 OR4S2Q8NH73 311 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 LKAAEAR1Q8TD35 194 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 SYAP1Q96A49 352 aaPredicted RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RPRD1AQ96P16 312 aaPredicted RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 MFFQ9GZY8 342 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 PARP12Q9H0J9 701 aaKnown RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 AZI2Q9H6S1 392 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 RABL2AQ9UBK7 228 aaPredicted RBP2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 SNX6Q9UNH7 406 aa2.49□□□□□ -2.01
SCAMP1-205ENST00000614488 TRAV26-1A0A087WT03 109 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 TMEM223A0PJW6 202 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 GOLGA8SH3BPF8 625 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 NDC80O14777 642 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 AK4P27144 223 aaPredicted RBP2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 CD1CP29017 333 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 LOXL1Q08397 574 aaPredicted RBP2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 GINS1Q14691 196 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 TAF7Q15545 349 aaPredicted RBP2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 POU2AF1Q16633 256 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 ANKDD1AQ495B1 522 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 ZNF684Q5T5D7 378 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 DHDDSQ86SQ9 333 aa2.48□□□□□ -2.01
SCAMP1-205ENST00000614488 PUSL1Q8N0Z8 303 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms