RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 ADAP2Q9NPF8 381 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 C14orf105Q9NVL8 296 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 ETV7Q9Y603 341 aa12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 SPTBN5Q9NRC6 3674 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-220ENST00000560998 CDHR4A6H8M9 788 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 J3QLW9 94 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 FGF16O43320 207 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 CSF1P09603 554 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 CALCBP10092 127 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 PRG2P13727 222 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF19P17023 458 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 DPP4P27487 766 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 BDKRB2P30411 391 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ACVR1BP36896 505 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 LUMP51884 338 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF136P52737 540 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 MGAT2Q10469 447 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 EIPR1Q53HC9 387 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF813Q6ZN06 617 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 OOSP2Q86WS3 158 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 MUC20Q8N307 709 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 OR1S2Q8NGQ3 325 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 HAVCR1Q96D42 359 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 CNTNAP3BQ96NU0 1288 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 EGLN1Q9GZT9 426 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 ZNF576Q9H609 170 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 STARD5Q9NSY2 213 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 HAO2Q9NYQ3 351 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 MTCH2Q9Y6C9 303 aa12.71□□□□□ -0.37
RABGGTA-220ENST00000560998 FAM86C2PA6NEL3 165 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ACOD1A6NK06 481 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF729A6NN14 1252 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 IFITM5A6NNB3 132 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 HCRTR1O43613 425 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 FMO6PO60774 539 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 IFI6P09912 130 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SBK2P0C263 348 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CTSEP14091 401 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 DCTDP32321 178 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SNRPEP62304 92 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ACTA2P62736 377 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ACTG2P63267 376 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ZNF85Q03923 595 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 C1orf61Q13536 156 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CBFBQ13951 182 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CDK5R1Q15078 307 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 PEA15Q15121 130 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 PRICKLE4Q2TBC4 344 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 DCST2Q5T1A1 773 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 GLT8D1Q68CQ7 371 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 RPL13AP3Q6NVV1 102 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SYS1Q8N2H4 156 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 C15orf54Q8N8G6 183 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CDRT4Q8N9R6 151 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM255BQ8WV15 326 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CCDC107Q8WV48 283 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 STACQ99469 402 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 CCDC3Q9BQI4 270 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 PAPOLGQ9BWT3 736 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 GPR174Q9BXC1 333 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SEMA6CQ9H3T2 930 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 C1orf198Q9H425 327 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM138Q9NPI0 162 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 DUSP22Q9NRW4 184 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TNFSF18Q9UNG2 199 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 AK6Q9Y3D8 172 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TDRD6O60522 2096 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 EFCAB7A8K855 629 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 PHYHO14832 338 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 GKN3PP0CG01 181 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 MAP3K8P41279 467 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 GPR4P46093 362 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 OC90Q02509 493 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 HHEXQ03014 270 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ZCCHC12Q6PEW1 402 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 UNQ9370/PRO34162Q6UXP9 181 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 NRMQ8IXM6 262 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ANKRD9Q96BM1 317 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SAMD8Q96LT4 415 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM185BQ9H7F4 350 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 APMAPQ9HDC9 416 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 FAM60AQ9NP50 221 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 ASF1BQ9NVP2 202 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 WSB2Q9NYS7 404 aaPredicted RBP12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SLC7A7Q9UM01 511 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 SLCO1B1Q9Y6L6 691 aa12.7□□□□□ -0.38
RABGGTA-220ENST00000560998 TMEM272A0A1B0GTI8 110 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms