RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 OR5P2Q8WZ92 322 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 ELMOD3Q96FG2 381 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 MAGEB18Q96M61 343 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 TUBB1Q9H4B7 451 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 ZNF224Q9NZL3 707 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 RASD1Q9Y272 281 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 DNAH7Q8WXX0 4024 aa11.69□□□□□ -0.54
SNX1-214ENST00000625244 LSM1O15116 133 aaKnown RBP11.68□□□□□ -0.54
SNX1-214ENST00000625244 HDAC3O15379 428 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SHOX2O60902 331 aaPredicted RBP11.68□□□□□ -0.54
SNX1-214ENST00000625244 PEX11AO75192 247 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 UBOX5O94941 541 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 AK1P00568 194 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 FAM157BP0CG42 384 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 ZNF250P15622 560 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 MATN1P21941 496 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SLC6A9P48067 706 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 MAP2K6P52564 334 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SELENOVP59797 346 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 BNIP2Q12982 314 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 RAB39AQ14964 217 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 RFTN2Q52LD8 501 aaPredicted RBP11.68□□□□□ -0.54
SNX1-214ENST00000625244 XKR7Q5GH72 579 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 FAM205BPQ63HN1 556 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 ZNF620Q6ZNG0 422 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 ZNF584Q8IVC4 421 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 OR10S1Q8NGN2 331 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 OR2T11Q8NH01 316 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SYNPRQ8TBG9 265 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SFXN5Q8TD22 340 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 UPRTQ96BW1 309 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 C7orf26Q96N11 449 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 WWC2-AS2Q96NR7 200 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 TAPBPLQ9BX59 468 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 NUF2Q9BZD4 464 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 C20orf27Q9GZN8 174 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 OR51B6Q9H340 312 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 PNPOQ9NVS9 261 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 NECAP2Q9NVZ3 263 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 DCAF16Q9NXF7 216 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 SLCO1C1Q9NYB5 712 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 MARCOQ9UEW3 520 aaPredicted RBP11.68□□□□□ -0.54
SNX1-214ENST00000625244 EGFL7Q9UHF1 273 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 ATP6V1HQ9UI12 483 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 RCE1Q9Y256 329 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 LYSTQ99698 3801 aa11.68□□□□□ -0.54
SNX1-214ENST00000625244 A8MXK9 166 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 FRS3O43559 492 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 SBK2P0C263 348 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 PPIAL4GP0DN37 164 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 AQP5P55064 265 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 RAB1AP62820 205 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 GLO1Q04760 184 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 ZNF813Q6ZN06 617 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 C16orf62Q7Z3J2 963 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
SNX1-214ENST00000625244 CLEC4FQ8N1N0 589 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 PAQR4Q8N4S7 273 aaPredicted RBP11.67□□□□□ -0.54
SNX1-214ENST00000625244 TMEM86BQ8N661 226 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 PPP1R14AQ96A00 147 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 PATZ1Q9HBE1 687 aaKnown RBP11.67□□□□□ -0.54
SNX1-214ENST00000625244 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
SNX1-214ENST00000625244 SLC22A23A1A5C7 686 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 DUXAA6NLW8 204 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 M0R3G1 203 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 RAB36O95755 333 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 MELTFP08582 738 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 OR8G3PP0DMU2 310 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 HPCAL1P37235 193 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 RPL3P39023 403 aaKnown RBP11.66□□□□□ -0.54
SNX1-214ENST00000625244 SLC3A1Q07837 685 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 SMU1Q2TAY7 513 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 C6orf136Q5SQH8 315 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 NXNQ6DKJ4 435 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 FRRS1Q6ZNA5 592 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 LRRC34Q8IZ02 419 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 OIT3Q8WWZ8 545 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 MOAP1Q96BY2 351 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 DCLRE1CQ96SD1 692 aaKnown RBP11.66□□□□□ -0.54
SNX1-214ENST00000625244 DIRC2Q96SL1 478 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 PRPF18Q99633 342 aaKnown RBP11.66□□□□□ -0.54
SNX1-214ENST00000625244 MEAF6Q9HAF1 191 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 NOX4Q9NPH5 578 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.66□□□□□ -0.54
SNX1-214ENST00000625244 NOP53Q9NZM5 478 aaKnown RBP11.66□□□□□ -0.54
SNX1-214ENST00000625244 NPTNQ9Y639 398 aa11.66□□□□□ -0.54
SNX1-214ENST00000625244 HYDINQ4G0P3 5121 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 SPRY3O43610 288 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 LCKP06239 509 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 PATE4P0C8F1 98 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 B4GALT1P15291 398 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 ZNF43P17038 809 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 LBPP18428 481 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 CXCR1P25024 350 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms