RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 CHAC1Q9BUX1 264 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 GABARAPL3Q9BY60 117 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 LIN28AQ9H9Z2 209 aaKnown RBP2.56□□□□□ -2
SCAMP1-205ENST00000614488 UGT1A7Q9HAW7 530 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 UGT1A10Q9HAW8 530 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 UGT1A8Q9HAW9 530 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 TMOD2Q9NZR1 351 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 N6AMT1Q9Y5N5 214 aa2.56□□□□□ -2
SCAMP1-205ENST00000614488 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 A0A1B0GVI7 797 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 K7EQM0 130 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 MPHOSPH10O00566 681 aaKnown RBP2.55□□□□□ -2
SCAMP1-205ENST00000614488 WDR62O43379 1518 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 VAMP5O95183 116 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 HEXBP07686 556 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 DESP17661 470 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 GRIA1P42261 906 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 CCR8P51685 355 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 POLR2FP61218 127 aaKnown RBP2.55□□□□□ -2
SCAMP1-205ENST00000614488 OR4F3Q6IEY1 312 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 STRADAQ7RTN6 431 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 ECHDC2Q86YB7 292 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 MREGQ8N565 214 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 ZNF461Q8TAF7 563 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 SDR42E1Q8WUS8 393 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 PDXPQ96GD0 296 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 RBM14Q96PK6 669 aaKnown RBP2.55□□□□□ -2
SCAMP1-205ENST00000614488 TUBGCP6Q96RT7 1819 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 ZNF607Q96SK3 696 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 OSBPL10Q9BXB5 764 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 PALMDQ9NP74 551 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 BLOC1S6Q9UL45 172 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 MRPS7Q9Y2R9 242 aaKnown RBP2.55□□□□□ -2
SCAMP1-205ENST00000614488 RFNGQ9Y644 331 aa2.55□□□□□ -2
SCAMP1-205ENST00000614488 GPR179Q6PRD1 2367 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 CEMIPQ8WUJ3 1361 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 C7orf66A4D0T2 115 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 TOM1O60784 492 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 PEX11AO75192 247 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 FDFT1P37268 417 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 YAP1P46937 504 aaKnown RBP2.54□□□□□ -2
SCAMP1-205ENST00000614488 CYB561P49447 251 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 CDK16Q00536 496 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 SCRN3Q0VDG4 424 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 LINC00173Q6ZV60 143 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 BIVMQ86UB2 503 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 VSTM4Q8IW00 320 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 STPG2Q8N412 459 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 TRPV1Q8NER1 839 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 SGK3Q96BR1 496 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 RMI2Q96E14 147 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 COQ2Q96H96 371 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 OR10C1Q96KK4 312 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 CCT7Q99832 543 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 FAIM2Q9BWQ8 316 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 RMND5AQ9H871 391 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 ADAP2Q9NPF8 381 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 ZNF355PQ9NSJ1 428 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
SCAMP1-205ENST00000614488 HIVEP2P31629 2446 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 IGKV1D-13A0A0B4J2D9 117 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 NOL3O60936 208 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 SRP72O76094 671 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 CLDN9O95484 217 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 GUCA1CO95843 209 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 TPM2P07951 284 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 IGHV1-8P0DP01 117 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 IGKV1-13P0DP09 117 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 PSMA5P28066 241 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 RDXP35241 583 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 RORAP35398 523 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 RAP1AP62834 184 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 RPS21P63220 83 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 KCTD21Q4G0X4 260 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 VAX1Q5SQQ9 334 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 HES5Q5TA89 166 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 TRIM40Q6P9F5 258 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 Q6ZPB1 254 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 BHLHA15Q7RTS1 189 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 ZNF557Q8N988 423 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 RGP1Q92546 391 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 N4BP2L2Q92802 583 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 TSGA13Q96PP4 275 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 MTMR9Q96QG7 549 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 KCTD14Q9BQ13 255 aaPredicted RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 ULBP2Q9BZM5 246 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 EPS15L1Q9UBC2 864 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 RRP15Q9Y3B9 282 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 TMEM14AQ9Y6G1 99 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 DDX49Q9Y6V7 483 aaKnown RBP2.53□□□□□ -2
SCAMP1-205ENST00000614488 BRWD3Q6RI45 1802 aa2.53□□□□□ -2
SCAMP1-205ENST00000614488 CAPN1P07384 714 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 DBTP11182 482 aaKnown RBP2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 ESRRGP62508 458 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 KLHL30Q0D2K2 578 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 SYCNQ0VAF6 134 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 ERCC8Q13216 396 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 PRR9Q5T870 116 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
SCAMP1-205ENST00000614488 DUX4L9Q6RFH8 374 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms