RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MBD2Q9UBB5 411 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 MIOXQ9UGB7 285 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 ETV7Q9Y603 341 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 CPED1A4D0V7 1026 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CTAG2O75638 210 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CD8AP01732 235 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ERGP11308 486 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SELPP16109 830 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 LAG3P18627 525 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CD34P28906 385 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 DUSP8Q13202 625 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 DHRS2Q13268 280 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF345Q14585 488 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SCGB2B2Q4G0G5 96 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ACOT7LQ6ZUV0 252 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 GALNT16Q8N428 558 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 OR4K14Q8NGD5 310 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 OR51A4Q8NGJ6 313 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 PHYHIPQ92561 330 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 PHYHIPLQ96FC7 376 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CNTNAP3BQ96NU0 1288 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SLC46A2Q9BY10 475 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ULBP3Q9BZM4 244 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SFXN1Q9H9B4 322 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CDV3Q9UKY7 258 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 YBX2Q9Y2T7 364 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 AMY2AP04746 511 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ITGB2P05107 769 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SMIM6P0DI80 62 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 C6P13671 934 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 RPL4P36578 427 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 MNDAP41218 407 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 FHL1Q13642 323 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 Q499Y3 187 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 NRSN1Q8IZ57 195 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF511Q8NB15 262 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CXorf40AQ8TE69 158 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 MRPL48Q96GC5 212 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 FARSAQ9Y285 508 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ALOX12BO75342 701 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 HLA-AP01891 365 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 MYOGP15173 224 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 PRSS3P35030 304 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 PSMD4P55036 377 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SLC7A9P82251 487 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ARHGAP11BQ3KRB8 267 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 LIPNQ5VXI9 398 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ENPP7Q6UWV6 458 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ETV3LQ6ZN32 361 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF227Q86WZ6 799 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 SLC35F3Q8IY50 421 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 GABRG1Q8N1C3 465 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CLEC1AQ8NC01 280 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 OR5AK2Q8NH90 309 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 RASD2Q96D21 266 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 MRGPRX3Q96LB0 322 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 LINC00615Q96LM1 132 aaPredicted RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CHRNA9Q9UGM1 479 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
NPHP4-207ENST00000470763 DOCK9Q9BZ29 2069 aa12.53□□□□□ -0.4
NPHP4-207ENST00000470763 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.4
NPHP4-207ENST00000470763 GXYLT2A0PJZ3 443 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TTLL8A6PVC2 850 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 SULT2B1O00204 365 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 AKR1C3P42330 323 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PPT1P50897 306 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 RAB5BP61020 215 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 BTN3A2P78410 334 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 NTHL1P78549 312 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PRDX1Q06830 199 aaKnown RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 SMCO1Q147U7 214 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TRMT12Q53H54 448 aaKnown RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PRAMEF17Q5VTA0 474 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 C3orf33Q6P1S2 294 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 C5orf46Q6UWT4 87 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 OR2A1Q8NGT9 310 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TMED6Q8WW62 240 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ARL11Q969Q4 196 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF514Q96K75 400 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 MYADMQ96S97 322 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF576Q9H609 170 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.52□□□□□ -0.41
NPHP4-207ENST00000470763 MPDZO75970 2070 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM265A0A087WTH1 108 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM72A0PK05 275 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 RAB3DO95716 219 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 CXCL10P02778 98 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 S100A6P06703 90 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 NID1P14543 1247 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 ABOP16442 354 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 POU3F4P49335 361 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 DIO1P49895 249 aa12.52□□□□□ -0.41
NPHP4-207ENST00000470763 PLAURQ03405 335 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms