RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 C2CD3Q4AC94 2353 aa17.68■□□□□ 0.42
GTF3A-202ENST00000419181 A0A1W2PRG6 482 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 FAM107AO95990 144 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 CRYAAP02489 173 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 B4GALT1P15291 398 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 ARR3P36575 388 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 NAAAQ02083 359 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 SAMD4BQ5PRF9 694 aaKnown RBP17.67■□□□□ 0.42
GTF3A-202ENST00000419181 LRFN4Q6PJG9 635 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 ZNF813Q6ZN06 617 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 MYPOPQ86VE0 399 aaPredicted RBP17.67■□□□□ 0.42
GTF3A-202ENST00000419181 NRMQ8IXM6 262 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 FBXL14Q8N1E6 418 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 FAM86B1Q8N7N1 296 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 ACOT11Q8WXI4 607 aaPredicted RBP17.67■□□□□ 0.42
GTF3A-202ENST00000419181 C18orf12Q96KH6 178 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 SEPHS2Q99611 448 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 GORASP2Q9H8Y8 452 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 INIPQ9NRY2 104 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 CBLN4Q9NTU7 201 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 B3GNT2Q9NY97 397 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 CD300AQ9UGN4 299 aa17.67■□□□□ 0.42
GTF3A-202ENST00000419181 SAMD4AQ9UPU9 718 aaKnown RBP17.67■□□□□ 0.42
GTF3A-202ENST00000419181 A0A087WUU8 490 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 NPIPB13A6NJU9 1138 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 NPIPB4C9JG80 1138 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 GMNNO75496 209 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 IGHG1P01857 330 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 CELA3BP08861 270 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 TCN1P20061 433 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 MAKP20794 623 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 CAPZA2P47755 286 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 FABP6P51161 128 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 DAP3P51398 398 aaKnown RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 PRKCDQ05655 676 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 RUNX1T1Q06455 604 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 KRT72Q14CN4 511 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 HIST3H3Q16695 136 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 GKAP1Q5VSY0 366 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 C16orf89Q6UX73 402 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 MDP1Q86V88 176 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 CYP4Z1Q86W10 505 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 RNF113BQ8IZP6 322 aaKnown RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 FITM2Q8N6M3 262 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 ASB10Q8WXI3 467 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 C7orf34Q96L11 122 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 CDRT15Q96T59 188 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 KCNS3Q9BQ31 491 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 MRPL13Q9BYD1 178 aaKnown RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 ANKRD19PQ9H560 264 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 NMNAT1Q9HAN9 279 aaPredicted RBP17.66■□□□□ 0.42
GTF3A-202ENST00000419181 NDE1Q9NXR1 346 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 ZNF224Q9NZL3 707 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 NDUFAF4Q9P032 175 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 MAGEL2Q9UJ55 1249 aa17.66■□□□□ 0.42
GTF3A-202ENST00000419181 CENPBD1B2RD01 187 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 MCIDASD6RGH6 385 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 HLA-HP01893 362 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 IDH3GP51553 393 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-202ENST00000419181 LAPTM4AQ15012 233 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 ETFDHQ16134 617 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 ARMC4Q5T2S8 1044 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 ZNF730Q6ZMV8 503 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 MBOAT2Q6ZWT7 520 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 PIWIL3Q7Z3Z3 882 aaKnown RBP17.65■□□□□ 0.42
GTF3A-202ENST00000419181 HDDC2Q7Z4H3 204 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 NOXO1Q8NFA2 376 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 COX4I2Q96KJ9 171 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 GSX1Q9H4S2 264 aaPredicted RBP17.65■□□□□ 0.42
GTF3A-202ENST00000419181 NOX3Q9HBY0 568 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 NF1P21359 2839 aa17.65■□□□□ 0.42
GTF3A-202ENST00000419181 A0A1W2PRQ8 180 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 TRIM64A6NGJ6 449 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 TRIM64BA6NI03 449 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 DHHO43323 396 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 NDUFS7O75251 213 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 IGHV4-39P01824 125 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 QDPRP09417 244 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 INHBBP09529 407 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 SAGP10523 405 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-202ENST00000419181 CALCRP30988 508 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 APOBEC3AP31941 199 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-202ENST00000419181 MSX2P35548 267 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-202ENST00000419181 MNAT1P51948 309 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 CLRN1P58418 232 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 VLDLRP98155 873 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 NPRL3Q12980 569 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 FHL1Q13642 323 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 DGCR6Q14129 220 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 GSG1Q2KHT4 349 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 SPATS1Q496A3 300 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 ALG10Q5BKT4 473 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 TBPL2Q6SJ96 375 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 MEX3DQ86XN8 651 aaKnown RBP17.64■□□□□ 0.41
GTF3A-202ENST00000419181 DEFB107AQ8IZN7 70 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 CIARTQ8N365 385 aaPredicted RBP17.64■□□□□ 0.41
GTF3A-202ENST00000419181 SLC7A13Q8TCU3 470 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 ZNF75AQ96N20 296 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 ZNF347Q96SE7 839 aa17.64■□□□□ 0.41
GTF3A-202ENST00000419181 BDH2Q9BUT1 245 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms