RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 TMEM82A0PJX8 343 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 SLC35E2P0CK97 266 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 LIM2P55344 173 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 GALEQ14376 348 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 DPPA2Q7Z7J5 298 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 DNAJC5GQ8N7S2 189 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 K7EQM0 130 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 CACNG3O60359 315 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 NSA2O95478 260 aaKnown RBP12.21□□□□□ -0.45
COL1A1-201ENST00000225964 FURINP09958 794 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 RPS23P62266 143 aaKnown RBP12.21□□□□□ -0.45
COL1A1-201ENST00000225964 RPS25P62851 125 aaKnown RBP12.21□□□□□ -0.45
COL1A1-201ENST00000225964 RBMS3Q6XE24 437 aaKnown RBP12.21□□□□□ -0.45
COL1A1-201ENST00000225964 IDO2Q6ZQW0 420 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 NOXA1Q86UR1 476 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 CENPOQ9BU64 300 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 NRIP3Q9NQ35 241 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 UFSP2Q9NUQ7 469 aa12.21□□□□□ -0.45
COL1A1-201ENST00000225964 SELENOFO60613 162 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 FOLR1P15328 257 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 HNRNPFP52597 415 aaKnown RBP12.21□□□□□ -0.46
COL1A1-201ENST00000225964 DPY19L2P2Q6ZN68 376 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF767PQ75MW2 155 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 GCNT2Q8N0V5 402 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 SLC22A24Q8N4F4 322 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 TMEM104Q8NE00 496 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 FAM213BQ8TBF2 198 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 PDLIM5Q96HC4 596 aaKnown RBP12.21□□□□□ -0.46
COL1A1-201ENST00000225964 ATOH8Q96SQ7 321 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 PDCD1LG2Q9BQ51 273 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 MBNL1Q9NR56 388 aaKnown RBP12.21□□□□□ -0.46
COL1A1-201ENST00000225964 B3GALT4O96024 378 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 UBE2KP61086 200 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 GGTA1PQ4G0N0 100 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 PHLDA2Q53GA4 152 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 ARFGAP1Q8N6T3 406 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 SLC35A4Q96G79 324 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 PHF7Q9BWX1 381 aaPredicted RBP12.21□□□□□ -0.46
COL1A1-201ENST00000225964 GLIPR2Q9H4G4 154 aa12.21□□□□□ -0.46
COL1A1-201ENST00000225964 OR2T7P0C7T2 308 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ADPRHP54922 357 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 TLE4Q04727 773 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ALKBH6Q3KRA9 238 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF718Q3SXZ3 478 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 CD300LGQ6UXG3 332 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 NAXDQ8IW45 347 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 UBAC2Q8NBM4 344 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 PFN4Q8NHR9 129 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 LRFN5Q96NI6 719 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 SLC22A12Q96S37 553 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 HEYLQ9NQ87 328 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 A0A1B0GWA3 101 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 LGALS8O00214 317 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 CTNSO60931 367 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 SCGB1D1O95968 90 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 CD1CP29017 333 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 CST9Q5W186 159 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF582Q96NG8 517 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 SLC29A1Q99808 456 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 GPR173Q9NS66 373 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 NDRG3Q9UGV2 375 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 OR52A1Q9UKL2 312 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 GPR171O14626 319 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 IL2RAP01589 272 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 IGFBP1P08833 259 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ALKBH1Q13686 389 aaKnown RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 KCNG3Q8TAE7 436 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 LGALS14Q8TCE9 139 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 MED18Q9BUE0 208 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 PURGQ9UJV8 347 aaKnown RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 AIPO00170 330 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 GABRA5P31644 462 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ADPRMQ3LIE5 342 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 FAM26DQ5JW98 314 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 COX20Q5RI15 118 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 GJC3Q8NFK1 279 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ZDHHC16Q969W1 377 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 TMEM43Q9BTV4 400 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 COPS3Q9UNS2 423 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 IGHV3-64DA0A0J9YX35 117 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 TBPP20226 339 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 ZNF93P35789 620 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 EMP3P54852 163 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 C1orf140Q5VVS0 124 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 Q6ZPB1 254 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-201ENST00000225964 GDF7Q7Z4P5 450 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 KCNJ15Q99712 375 aa12.2□□□□□ -0.46
COL1A1-201ENST00000225964 H0YIV9 168 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 ALDOCP09972 364 aaKnown RBP12.19□□□□□ -0.46
COL1A1-201ENST00000225964 IVDP26440 423 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 IRS1P35568 1242 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 TESK1Q15569 626 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 NHSL2Q5HYW2 709 aa12.19□□□□□ -0.46
COL1A1-201ENST00000225964 CREB3L2Q70SY1 520 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms