RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 BIVMQ86UB2 503 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 AMZ2Q86W34 360 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 GTPBP8Q8N3Z3 284 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 GALNT16Q8N428 558 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 PLPP7Q8NBV4 271 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 NXPE3Q969Y0 559 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 MYADMQ96S97 322 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 CPEB1Q9BZB8 566 aaKnown RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 AKAP7Q9P0M2 348 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 DEC1Q9P2X7 70 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF629Q9UEG4 869 aaPredicted RBP12.57□□□□□ -0.4
SCARB2-227ENST00000640957 SIGLEC7Q9Y286 467 aa12.57□□□□□ -0.4
SCARB2-227ENST00000640957 SEC16AO15027 2179 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 CARNS1A5YM72 827 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF879B4DU55 563 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 DCNP07585 359 aaKnown RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NGFRP08138 427 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NQO2P16083 231 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NDUFS1P28331 727 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 PPM1AP35813 382 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 BCL6P41182 706 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 CENPAP49450 140 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 ELAVL1Q15717 326 aaKnown RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 JMJD6Q6NYC1 403 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NAXDQ8IW45 347 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 LNX2Q8N448 690 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 LCORQ96JN0 433 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 MAP3K3Q99759 626 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 BCL2L10Q9HD36 194 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 COMMD9Q9P000 198 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 SLC35A3Q9Y2D2 325 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 HMSDA8MTL9 139 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 OR4E1P0C645 316 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 BDH1Q02338 343 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NR0B2Q15466 257 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 SLC22A6Q4U2R8 563 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 DMRTC1Q5HYR2 192 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 ARHGAP40Q5TG30 622 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 PRAMEF17Q5VTA0 474 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 C3orf33Q6P1S2 294 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 C10orf53Q8N6V4 93 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 BHLHE23Q8NDY6 225 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 OR4E2Q8NGC2 313 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 FGF13Q92913 245 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF285Q96NJ3 590 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 NAA11Q9BSU3 229 aaPredicted RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 ATG5Q9H1Y0 275 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 STEAP1Q9UHE8 339 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 TINAGQ9UJW2 476 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 IGKV1-8A0A0C4DH67 115 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 BLOC1S5-TXNDC5H3BN57 136 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 HLA-AP01891 365 aaKnown RBP12.56□□□□□ -0.4
SCARB2-227ENST00000640957 SLC35G4P0C7Q5 338 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 SEC13P55735 322 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 OLFML2AQ68BL7 652 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 SLC25A32Q9H2D1 315 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 MED9Q9NWA0 146 aa12.56□□□□□ -0.4
SCARB2-227ENST00000640957 C5orf51A6NDU8 294 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 IGLON5A6NGN9 336 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 LRRC72A6NJI9 287 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 METTL12A8MUP2 240 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 PRRT4C9JH25 899 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 ADH5P11766 374 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 PGAM2P15259 253 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 AKR1C4P17516 323 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 CEBPBP17676 345 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 CSNK1G2P78368 415 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 NCMAPQ5T1S8 102 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 LRRC69Q6ZNQ3 347 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 OR5T2Q8NGG2 359 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 CLCC1Q96S66 551 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 APMAPQ9HDC9 416 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 MED17Q9NVC6 651 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 MBD2Q9UBB5 411 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 MED31Q9Y3C7 131 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TRAV1-2A0A0B4J238 106 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 EMC8O43402 210 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 PGDP52209 483 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 PNLIPRP2P54317 469 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TAS2R43P59537 309 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM44Q2T9K0 475 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 ACER2Q5QJU3 275 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 POMZP3Q6PJE2 187 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 GATSQ8NAP1 163 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 ELP5Q8TE02 316 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 EDARADDQ8WWZ3 215 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TMEM106AQ96A25 262 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 CNN2Q99439 309 aaKnown RBP12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TMPRSS13Q9BYE2 586 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 KLHDC2Q9Y2U9 406 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF780BQ9Y6R6 833 aa12.55□□□□□ -0.4
SCARB2-227ENST00000640957 TRAPPC13A5PLN9 417 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 RFPL4AA6NLU0 287 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 SNRPGP15A8MWD9 76 aa12.54□□□□□ -0.4
SCARB2-227ENST00000640957 RFPL4AL1F8VTS6 287 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms