RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 OR4K13Q8NH42 304 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 ZNF519Q8TB69 540 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 HDAC2Q92769 488 aaKnown RBP14.73□□□□□ -0.05
CCNA1-203ENST00000625767 VCX3BQ9H321 246 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 FN3KQ9H479 309 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 C12orf49Q9H741 205 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 TVP23BQ9NYZ1 205 aa14.73□□□□□ -0.05
CCNA1-203ENST00000625767 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 BCL10O95999 233 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 IGHV3-9P01782 118 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 YES1P07947 543 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 FCGR2AP12318 317 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 CDH2P19022 906 aaPredicted RBP14.72□□□□□ -0.05
CCNA1-203ENST00000625767 SDHAP31040 664 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 PTGER4P35408 488 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 ACVR1BP36896 505 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 CDKN2AP42771 156 aaKnown RBP14.72□□□□□ -0.05
CCNA1-203ENST00000625767 PHYHD1Q5SRE7 291 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 C12orf73Q69YU5 71 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 NIPAL3Q6P499 406 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 BCDIN3DQ7Z5W3 292 aaKnown RBP14.72□□□□□ -0.05
CCNA1-203ENST00000625767 DHRSXQ8N5I4 330 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 HRASLS5Q96KN8 279 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 RDH12Q96NR8 316 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 DMRTA2Q96SC8 542 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 GRHPRQ9UBQ7 328 aa14.72□□□□□ -0.05
CCNA1-203ENST00000625767 NDRG4Q9ULP0 352 aaKnown RBP14.72□□□□□ -0.05
CCNA1-203ENST00000625767 FAM183AA6NL82 134 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 ARPC3O15145 178 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 SURF4O15260 269 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 SLC16A6O15403 523 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 ARHGEF9O43307 516 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 PRKYO43930 277 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 SS18L1O75177 396 aaPredicted RBP14.71□□□□□ -0.05
CCNA1-203ENST00000625767 STSP08842 583 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 NOS3P29474 1203 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 GGT2P36268 569 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 KIR2DL2P43627 348 aaPredicted RBP14.71□□□□□ -0.05
CCNA1-203ENST00000625767 RPS6KA3P51812 740 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 SMSP52788 366 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 PER3P56645 1201 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 KRR1Q13601 381 aaKnown RBP14.71□□□□□ -0.05
CCNA1-203ENST00000625767 PDK3Q15120 406 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 CASP12Q6UXS9 341 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 TMEM123Q8N131 208 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 ARIH2OSQ8N7S6 290 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 CNEP1R1Q8N9A8 125 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 OR52E2Q8NGJ4 325 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 PRR7Q8TB68 274 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 FAM81AQ8TBF8 368 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 GMPPAQ96IJ6 420 aaPredicted RBP14.71□□□□□ -0.05
CCNA1-203ENST00000625767 OR2M2Q96R28 347 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 NMNAT3Q96T66 252 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 PITX2Q99697 317 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 HCAR1Q9BXC0 346 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 MED20Q9H944 212 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 NOSIPQ9Y314 301 aaKnown RBP14.71□□□□□ -0.05
CCNA1-203ENST00000625767 GMPPBQ9Y5P6 360 aa14.71□□□□□ -0.05
CCNA1-203ENST00000625767 IGKV1D-43A0A0B4J1Z2 117 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 A0A0G2JNJ9 132 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TRMUO75648 421 aaKnown RBP14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TNFSF13O75888 250 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 ZNF432O94892 652 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 CEACAM8P31997 349 aaPredicted RBP14.71□□□□□ -0.06
CCNA1-203ENST00000625767 CAPGP40121 348 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 DAP3P51398 398 aaKnown RBP14.71□□□□□ -0.06
CCNA1-203ENST00000625767 FMODQ06828 376 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 CRMP1Q14194 572 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TAF11Q15544 211 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 FJX1Q86VR8 437 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 GALNT11Q8NCW6 608 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TFAP2CQ92754 450 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TSSK2Q96PF2 358 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 ZNF184Q99676 751 aaPredicted RBP14.71□□□□□ -0.06
CCNA1-203ENST00000625767 TM9SF2Q99805 663 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 RASSF4Q9H2L5 321 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 Q9UFV3 132 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 ENOPH1Q9UHY7 261 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 MEMO1Q9Y316 297 aa14.71□□□□□ -0.06
CCNA1-203ENST00000625767 NCOA6Q14686 2063 aaPredicted RBP14.71□□□□□ -0.06
CCNA1-203ENST00000625767 MYO18BQ8IUG5 2567 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 NPIPB13A6NJU9 1138 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 ZNF724A8MTY0 619 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 NPIPB4C9JG80 1138 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 H0YJX3 145 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 CCL21O00585 134 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 TXNDC12O95881 172 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 PGA4P0DJD7 388 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 PGA3P0DJD8 388 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 TMIGD3P0DMS9 266 aaPredicted RBP14.7□□□□□ -0.06
CCNA1-203ENST00000625767 CLUP10909 449 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 ACADSP16219 412 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 GRK5P34947 590 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 TIMP3P35625 211 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCNA1-203ENST00000625767 SF3B4Q15427 424 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCNA1-203ENST00000625767 SNAPC1Q16533 368 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 LEG1Q6P5S2 330 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 FAM214BQ7L5A3 538 aa14.7□□□□□ -0.06
CCNA1-203ENST00000625767 LINGO2Q7L985 606 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms