RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 KIR2DL5AQ8N109 375 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF709Q8N972 641 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 LRRC58Q96CX6 371 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 AURKBQ96GD4 344 aaPredicted RBP2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 SENP8Q96LD8 212 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 LINC00477Q96M19 166 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 CLCC1Q96S66 551 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 ING2Q9H160 280 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 NOX3Q9HBY0 568 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 SLC40A1Q9NP59 571 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 SPATA7Q9P0W8 599 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 TMCC3Q9ULS5 477 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 MEMO1Q9Y316 297 aa2.64□□□□□ -1.99
SCAMP1-205ENST00000614488 PNPLA6Q8IY17 1366 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 IGLV2-18A0A075B6J9 118 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 IGHV3-66A0A0C4DH42 116 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 XPO1O14980 1071 aaKnown RBP2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 POLR2DO15514 142 aaKnown RBP2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 ENTPD5O75356 428 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 RBBP9O75884 186 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 DIRAS1O95057 198 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 C6orf47O95873 294 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 IFNB1P01574 187 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 SMIM10L1P0DMW3 83 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 KRT13P13646 458 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 MUC1P15941 1255 aaPredicted RBP2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 ATP6V1C1P21283 382 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 CNR1P21554 472 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 CD86P42081 329 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 GSSP48637 474 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 OR5I1Q13606 314 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 FZD2Q14332 565 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 PDK4Q16654 411 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 HMGN2P46Q86SG4 172 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 PLA2G4DQ86XP0 818 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 ACOT4Q8N9L9 421 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 IPMKQ8NFU5 416 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 DNAJC19Q96DA6 116 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 SMIM10Q96HG1 83 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF641Q96N77 438 aaPredicted RBP2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 KIF16BQ96L93 1317 aa2.63□□□□□ -1.99
SCAMP1-205ENST00000614488 NUP214P35658 2090 aaPredicted RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 COLCA2A8K830 154 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 PRRG1O14668 218 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 MED7O43513 233 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 TLX1NBP0CAT3 122 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 HMGB2P26583 209 aaKnown RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 GNA11P29992 359 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 PDIA2Q13087 525 aaKnown RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF836Q6ZNA1 936 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 TMEM123Q8N131 208 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 FAM133AQ8N9E0 248 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 OR52H1Q8NGJ2 320 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 TRMT10AQ8TBZ6 339 aaKnown RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 ZNF2Q9BSG1 426 aaPredicted RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 RPP21Q9H633 154 aaKnown RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 LY9Q9HBG7 655 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 RAB18Q9NP72 206 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 SLCO1B3Q9NPD5 702 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 SIRT7Q9NRC8 400 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 SLC35D1Q9NTN3 355 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 EXD2Q9NVH0 621 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 HPF1Q9NWY4 346 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 MMP17Q9ULZ9 603 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 F11RQ9Y624 299 aaKnown RBP2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 NFASCO94856 1347 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 IGSF9BQ9UPX0 1349 aa2.62□□□□□ -1.99
SCAMP1-205ENST00000614488 HSD17B6O14756 317 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 RAMP3O60896 148 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 PGAM1P18669 254 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 ACAA2P42765 397 aaKnown RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 KLHL38Q2WGJ6 581 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 TTLL9Q3SXZ7 439 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 KPRPQ5T749 579 aaPredicted RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 Q5W150 140 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 UTS2BQ765I0 119 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 THOC6Q86W42 341 aaKnown RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 PGAM4Q8N0Y7 254 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 ZADH2Q8N4Q0 377 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 C15orf56Q8N910 161 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 CXorf40BQ96DE9 158 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 OR2A5Q96R48 311 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 SECISBP2Q96T21 854 aaKnown RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 LINC00597Q9H2U6 94 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 RIBC2Q9H4K1 309 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 MRPL47Q9HD33 250 aaKnown RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 SMOXQ9NWM0 555 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 CD84Q9UIB8 345 aa2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 MRPS33Q9Y291 106 aaKnown RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 MN1Q10571 1320 aaPredicted RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 RPAP1Q9BWH6 1393 aaPredicted RBP2.61□□□□□ -1.99
SCAMP1-205ENST00000614488 IGHV5-51A0A0C4DH38 117 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 OR5B21A6NL26 309 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 SCGNO76038 276 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 UGT2B4P06133 528 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 RPA2P15927 270 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 PSMC3P17980 439 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 ZBED5Q49AG3 693 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 NADK2Q4G0N4 442 aa2.6□□□□□ -1.99
SCAMP1-205ENST00000614488 SFT2D3Q587I9 215 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 198.7 ms