RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 PPP1R3DO95685 299 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 ERVK-25P63136 954 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 POU3F1Q03052 451 aaPredicted RBP14.79□□□□□ -0.04
CCNA1-203ENST00000625767 MELKQ14680 651 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 SLC17A1Q14916 467 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 RFX4Q33E94 735 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 GCNT2Q8N0V5 402 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 PARP8Q8N3A8 854 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 ZHX1-C8orf76Q96EF9 292 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 TXNDC15Q96J42 360 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 TACO1Q9BSH4 297 aaKnown RBP14.79□□□□□ -0.04
CCNA1-203ENST00000625767 NAA11Q9BSU3 229 aaPredicted RBP14.79□□□□□ -0.04
CCNA1-203ENST00000625767 KATNB1Q9BVA0 655 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 TSSK6Q9BXA6 273 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 PRRG4Q9BZD6 226 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 TBC1D23Q9NUY8 699 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 MED29Q9NX70 200 aa14.79□□□□□ -0.04
CCNA1-203ENST00000625767 MCTS1Q9ULC4 181 aaKnown RBP14.79□□□□□ -0.04
CCNA1-203ENST00000625767 HIVEP3Q5T1R4 2406 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 A0A1W2PNV4 684 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 AHRRA9YTQ3 701 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 IMPA2O14732 288 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 DNPH1O43598 174 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 CYTIPO60759 359 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 OR6A2O95222 327 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ACVR2AP27037 513 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 RPL4P36578 427 aaKnown RBP14.78□□□□□ -0.04
CCNA1-203ENST00000625767 CRISP1P54107 249 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 CTXN1P60606 82 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 RASGEF1BQ0VAM2 473 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ZP4Q12836 540 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 NPRL3Q12980 569 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 TOP3AQ13472 1001 aaPredicted RBP14.78□□□□□ -0.04
CCNA1-203ENST00000625767 C1orf185Q5T7R7 199 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ACSM5Q6NUN0 579 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 IZUMO2Q6UXV1 221 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ADPRHL1Q8NDY3 354 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 OR9K2Q8NGE7 335 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ZNF570Q96NI8 536 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 ZNF385AQ96PM9 386 aaKnown RBP14.78□□□□□ -0.04
CCNA1-203ENST00000625767 EMC6Q9BV81 110 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 GABARAPL3Q9BY60 117 aa14.78□□□□□ -0.04
CCNA1-203ENST00000625767 PAQR5Q9NXK6 330 aaPredicted RBP14.78□□□□□ -0.04
CCNA1-203ENST00000625767 B8ZZF3 427 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 BHLHE40O14503 412 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 PRRG2O14669 202 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 TRAF3IP2O43734 574 aaPredicted RBP14.77□□□□□ -0.04
CCNA1-203ENST00000625767 TOXO94900 526 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 EDNRAP25101 427 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 VHLP40337 213 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 UQCRFS1P47985 274 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 PTGES3Q15185 160 aaKnown RBP14.77□□□□□ -0.04
CCNA1-203ENST00000625767 MARVELD2Q8N4S9 558 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 PACRGLQ8N7B6 248 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 CLDN22Q8N7P3 220 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 ZIC4Q8N9L1 334 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 RASD2Q96D21 266 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 TSPAN32Q96QS1 320 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 IFT27Q9BW83 186 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 INIPQ9NRY2 104 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 SMPD3Q9NY59 655 aaPredicted RBP14.77□□□□□ -0.04
CCNA1-203ENST00000625767 IER3IP1Q9Y5U9 82 aa14.77□□□□□ -0.04
CCNA1-203ENST00000625767 FIGNL2A6NMB9 653 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 WDR1O75083 606 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 RCBTB2O95199 551 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 SLC2A10O95528 541 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 CLIC3O95833 236 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 IFNGR1P15260 489 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 PRPS1P60891 318 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 RUNX1T1Q06455 604 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 GINS1Q14691 196 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 ACKR1Q16570 336 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 SLC35F1Q5T1Q4 408 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 EEF1A1P5Q5VTE0 462 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 NSUN5P2Q63ZY6 315 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 CREB3L2Q70SY1 520 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 FAM122BQ7Z309 247 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 P4HA3Q7Z4N8 544 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 TUSC5Q8IXB3 177 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 NAXEQ8NCW5 288 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 TEX47Q8TBZ9 253 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 DNAJC9Q8WXX5 260 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 Q96M85 177 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 OXGR1Q96P68 337 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 GRIP2Q9C0E4 1043 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 RNF122Q9H9V4 155 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 FANCFQ9NPI8 374 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 NRIP3Q9NQ35 241 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 ZNF346Q9UL40 294 aaKnown RBP14.77□□□□□ -0.05
CCNA1-203ENST00000625767 OSGIN2Q9Y236 505 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 RASD1Q9Y272 281 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 ZNF175Q9Y473 711 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 FLVCR1Q9Y5Y0 555 aa14.77□□□□□ -0.05
CCNA1-203ENST00000625767 E9PQ18 207 aa14.76□□□□□ -0.05
CCNA1-203ENST00000625767 GABRA1P14867 456 aa14.76□□□□□ -0.05
CCNA1-203ENST00000625767 RAD23AP54725 363 aa14.76□□□□□ -0.05
CCNA1-203ENST00000625767 CDK5Q00535 292 aa14.76□□□□□ -0.05
CCNA1-203ENST00000625767 RBPJQ06330 500 aa14.76□□□□□ -0.05
CCNA1-203ENST00000625767 FOXF2Q12947 444 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms