RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 CNMDO75829 334 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 GADD45GO95257 159 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 CNOT4O95628 575 aaKnown RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 IFNA10P01566 189 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 SNRNP70P08621 437 aaKnown RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 SPP1P10451 314 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 ADARB1P78563 741 aaKnown RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 MPP1Q00013 466 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 BTN1A1Q13410 526 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 FXNQ16595 210 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 HSD17B12Q53GQ0 312 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 PRSS36Q5K4E3 855 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 ANKRD34AQ69YU3 496 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 REEP3Q6NUK4 255 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 HIPK1Q86Z02 1210 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 PYROXD2Q8N2H3 581 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 VGLL2Q8N8G2 317 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 OR10AD1Q8NGE0 317 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 FAM110BQ8TC76 370 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 WNT2BQ93097 391 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 MRGPRX4Q96LA9 322 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 NODALQ96S42 347 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 MEPEQ9NQ76 525 aaPredicted RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 KCNG2Q9UJ96 466 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 OSGIN1Q9UJX0 560 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 TRAF6Q9Y4K3 522 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 TIMM22Q9Y584 194 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 FAM25EA8MYX2 175 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 SYT7O43581 403 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 TK1P04183 234 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 PET100P0DJ07 73 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 CD36P16671 472 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 USF1P22415 310 aaPredicted RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 TGM1P22735 817 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 CEACAM8P31997 349 aaPredicted RBP3.76□□□□□ -1.81
USH2A-202ENST00000366942 MLLT10P55197 1068 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 SCARB2Q14108 478 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 PLBD1Q6P4A8 553 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 LRRN1Q6UXK5 716 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 ZNF546Q86UE3 836 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 NIPA2Q8N8Q9 360 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 TMEM105Q8N8V8 129 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 OR4A16Q8NH70 328 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 SLC7A6Q92536 515 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 RELTQ969Z4 430 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 RSPRY1Q96DX4 576 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 SLC35A4Q96G79 324 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 PCOLCE2Q9UKZ9 415 aa3.76□□□□□ -1.81
USH2A-202ENST00000366942 TOPAZ1Q8N9V7 1692 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 RGPD1P0DJD0 1748 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 SPAG17Q6Q759 2223 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 TRAV9-2A0A087WT02 112 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 IGKV6D-41A0A0C4DH26 115 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 A0A0G2JPF8 293 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 ZNF716A6NP11 495 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 HNRNPCL3B7ZW38 293 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 NRG2O14511 850 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 PRH1P02810 166 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 GLAP06280 429 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 ZNF888P0CJ79 500 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 HNRNPCL4P0DMR1 293 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 CPMP14384 443 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 ZNF26P17031 533 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 IVDP26440 423 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 ACVR1BP36896 505 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 CHRNA4P43681 627 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 CRADDP78560 199 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 PAFAH1B3Q15102 231 aaKnown RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 RSBN1Q5VWQ0 802 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 GRINAQ7Z429 371 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 REXO1L1PQ8IX06 675 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 DMBX1Q8NFW5 382 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 OR52L2PQ8NGH6 319 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 SAP25Q8TEE9 199 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 LIPHQ8WWY8 451 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 CLDN23Q96B33 292 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 ZBTB10Q96DT7 871 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 OLFM3Q96PB7 478 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 OR4K3Q96R72 315 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 HOPXQ9BPY8 73 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 OPN3Q9H1Y3 402 aaPredicted RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 SPNS1Q9H2V7 528 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 PTTG3PQ9NZH4 202 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 IL19Q9UHD0 177 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 QRICH2Q9H0J4 1663 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 PARP4Q9UKK3 1724 aaKnown RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 LMO7Q8WWI1 1683 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 XKRY2A2RUG3 117 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 OR51F1A6NGY5 319 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 CD300LBA8K4G0 201 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 B4DSR2 109 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 MED6O75586 246 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 SP1P08047 785 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 GATA3P23771 443 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 DNAJB1P25685 340 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 PAX6P26367 422 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 S100A4P26447 101 aaKnown RBP3.75□□□□□ -1.81
USH2A-202ENST00000366942 MVDP53602 400 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 GABARAPL2P60520 117 aa3.75□□□□□ -1.81
USH2A-202ENST00000366942 TSTQ16762 297 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms