RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 CLOCKO15516 846 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 OR2T1O43869 369 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 RAMP1O60894 148 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 AKR7A3O95154 331 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 IL2RAP01589 272 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 PRKCDQ05655 676 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 FBXL19-AS1Q494R0 122 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 SLC46A3Q7Z3Q1 461 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 TMEM179BQ7Z7N9 219 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 CCDC103Q8IW40 242 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 TMEM99Q8N816 258 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 C9orf106Q8NAJ2 232 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 OR4K5Q8NGD3 323 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 WNT2BQ93097 391 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 TAPBPLQ9BX59 468 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 KLHL4Q9C0H6 718 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 REEP1Q9H902 201 aa16.61■□□□□ 0.25
PNKP-224ENST00000631020 SAMHD1Q9Y3Z3 626 aaKnown RBP16.61■□□□□ 0.25
PNKP-224ENST00000631020 MBD3L4A6NDZ8 208 aaPredicted RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 MBD3L3A6NE82 208 aaPredicted RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 MBD3L5A6NJ08 208 aaPredicted RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 DNPH1O43598 174 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 SYNGR4O95473 234 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 IGF2P01344 180 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 IFI30P13284 250 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 MAKP20794 623 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 P2RY4P51582 365 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 CTBP2P56545 445 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 LAPTM4AQ15012 233 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 HMBOX1Q6NT76 420 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 PPP4R4Q6NUP7 873 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 C10orf53Q8N6V4 93 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 MBD3L2Q8NHZ7 208 aaPredicted RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 LRTOMTQ8WZ04 291 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 BPIFA2Q96DR5 249 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 LRRC46Q96FV0 321 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 MCTS1Q9ULC4 181 aaKnown RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 CCDC168Q8NDH2 2452 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 GNGT2O14610 69 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 FUT1P19526 365 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 GRPRP30550 384 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 OMPP47874 163 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 ATP6AP1Q15904 470 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 ZFP1Q6P2D0 407 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 PAQR6Q6TCH4 344 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 FCRLAQ7L513 359 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 RRM2BQ7LG56 351 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 AMIGO2Q86SJ2 522 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 NAXEQ8NCW5 288 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 RNF128Q8TEB7 428 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 SGTBQ96EQ0 304 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 S100A14Q9HCY8 104 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 FOXD3Q9UJU5 478 aaPredicted RBP16.6■□□□□ 0.25
PNKP-224ENST00000631020 TMCC3Q9ULS5 477 aa16.6■□□□□ 0.25
PNKP-224ENST00000631020 MED12LQ86YW9 2145 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 M0R082 166 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 EIF1BO60739 113 aaKnown RBP16.59■□□□□ 0.25
PNKP-224ENST00000631020 OR7A10O76100 309 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 IL18BPO95998 194 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 MT-ATP6P00846 226 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 FASP25445 335 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ASCL1P50553 236 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 TAF11Q15544 211 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ZNF770Q6IQ21 691 aaPredicted RBP16.59■□□□□ 0.25
PNKP-224ENST00000631020 ZER1Q7Z7L7 766 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 RELL2Q8NC24 303 aaPredicted RBP16.59■□□□□ 0.25
PNKP-224ENST00000631020 ZNF417Q8TAU3 575 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ABHD3Q8WU67 409 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 LIPHQ8WWY8 451 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ZFP3Q96NJ6 502 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ZNF587Q96SQ5 575 aaPredicted RBP16.59■□□□□ 0.25
PNKP-224ENST00000631020 GPA33Q99795 319 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 PRRG4Q9BZD6 226 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 RNF122Q9H9V4 155 aa16.59■□□□□ 0.25
PNKP-224ENST00000631020 ING1Q9UK53 422 aaPredicted RBP16.59■□□□□ 0.25
PNKP-224ENST00000631020 AQP7P3A6NL99 342 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 VGLL3A8MV65 326 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 CDC42EP2O14613 210 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 CYTIPO60759 359 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 DEAF1O75398 565 aaPredicted RBP16.58■□□□□ 0.24
PNKP-224ENST00000631020 ASAH2BP0C7U1 165 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 VHLP40337 213 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 GPR4P46093 362 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 KRTAP10-9P60411 292 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 OTUD3Q5T2D3 398 aaPredicted RBP16.58■□□□□ 0.24
PNKP-224ENST00000631020 TMPRSS11FQ6ZWK6 438 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 HS3ST5Q8IZT8 346 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 ZHX1-C8orf76Q96EF9 292 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 FAM46AQ96IP4 442 aaKnown RBP16.58■□□□□ 0.24
PNKP-224ENST00000631020 PKP2Q99959 881 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 NAA11Q9BSU3 229 aaPredicted RBP16.58■□□□□ 0.24
PNKP-224ENST00000631020 FKRPQ9H9S5 495 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 NANSQ9NR45 359 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 KLHL13Q9P2N7 655 aa16.58■□□□□ 0.24
PNKP-224ENST00000631020 HTR3EA5X5Y0 456 aa16.57■□□□□ 0.24
PNKP-224ENST00000631020 ZNF716A6NP11 495 aa16.57■□□□□ 0.24
PNKP-224ENST00000631020 MS4A18H0YCH9 400 aa16.57■□□□□ 0.24
PNKP-224ENST00000631020 KLF4O43474 513 aa16.57■□□□□ 0.24
PNKP-224ENST00000631020 OR10H3O60404 316 aa16.57■□□□□ 0.24
PNKP-224ENST00000631020 RCBTB2O95199 551 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms