RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TMEM31Q5JXX7 168 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 AVPI1Q5T686 147 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 OR6T1Q8NGN1 323 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 ABHD4Q8TB40 342 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 TM4SF19Q96DZ7 209 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 TCEAL7Q9BRU2 100 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 PTDSS2Q9BVG9 487 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 PINK1Q9BXM7 581 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 FXYD6Q9H0Q3 95 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 AUNIPQ9H7T9 357 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 GSN-AS1Q9NRJ2 163 aa12.83□□□□□ -0.36
RABGGTA-220ENST00000560998 LRRC72A6NJI9 287 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 EIF3GO75821 320 aaKnown RBP eCLIP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 KRT33AO76009 404 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 NDUFB6O95139 128 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 HEXAP06865 529 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 SMIM10L1P0DMW3 83 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 PAICSP22234 425 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 LTBRP36941 435 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 BUD31P41223 144 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 EIF1P41567 113 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 PGGHGQ32M88 737 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 TMEM255AQ5JRV8 349 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 BRIX1Q8TDN6 353 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 C15orf40Q8WUR7 153 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 SMIM10Q96HG1 83 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 OR2A5Q96R48 311 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 KLHL1Q9NR64 748 aa12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 SIRT4Q9Y6E7 314 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-220ENST00000560998 A0A0D9SG52 128 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 P2RX6O15547 441 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 CTSVO60911 334 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ACAA1P09110 424 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC35G6P0C7Q6 338 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 EPXP11678 715 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 S100PP25815 95 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 YPEL5P62699 121 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SIM1P81133 766 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 TNFRSF17Q02223 184 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 FCRL6Q6DN72 434 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ELP2Q6IA86 826 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 LDLRAD3Q86YD5 345 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SIRT6Q8N6T7 355 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 NDC1Q9BTX1 674 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 MFFQ9GZY8 342 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 QRSL1Q9H0R6 528 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC38A1Q9H2H9 487 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 C8orf33Q9H7E9 229 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ARHGEF17Q96PE2 2063 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 TCRBV21S2A2A0A5A6 115 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ANKRD20A5PA0PJZ0 165 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 FLRT2O43155 660 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 GATBO75879 557 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SPDEFO95238 335 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 GLAP06280 429 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 GP1BAP07359 652 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SNRPBP14678 240 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SPI1P17947 270 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ATF1P18846 271 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 FPR3P25089 353 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 AGTR1P30556 359 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 AKT2P31751 481 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 MNDAP41218 407 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 MLLT1Q03111 559 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 GPR18Q14330 331 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 LIN54Q6MZP7 749 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ARL9Q6T311 187 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 LINGO2Q7L985 606 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 PUSL1Q8N0Z8 303 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 NANPQ8TBE9 248 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 PIGXQ8TBF5 258 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 SERINC2Q96SA4 455 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ARHGDIGQ99819 225 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ACTRT3Q9BYD9 372 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ENKD1Q9H0I2 346 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 OR51M1Q9H341 326 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 C6orf106Q9H6K1 298 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
RABGGTA-220ENST00000560998 XIRP2A4UGR9 3374 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 TMEM218A2RU14 115 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OR6C74A6NCV1 312 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 SYT5O00445 386 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 EIF4E2O60573 245 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 ARL6IP5O75915 188 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 GABRG2P18507 467 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 PRKAR1BP31321 381 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 STARP49675 285 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 NRG3P56975 720 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 RUNX2Q13950 521 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 TRAM2Q15035 370 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FIGLAQ6QHK4 219 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 APOOLQ6UXV4 268 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 NHLRC1Q6VVB1 395 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 Q6ZSR6 202 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 LRRC25Q8N386 305 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 LILRB2Q8N423 598 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 162.8 ms