RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 LINC01590Q5TEZ4 76 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PRR23CQ6ZRP0 262 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 KANSL1Q7Z3B3 1105 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 ZNF441Q8N8Z8 693 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 IL17RDQ8NFM7 739 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 SAP25Q8TEE9 199 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 LIPHQ8WWY8 451 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PDCD1LG2Q9BQ51 273 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 DUSP23Q9BVJ7 150 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PCDHGB7Q9Y5F8 929 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PCDHGB2Q9Y5G2 931 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 TRBV2A0A0J9YWF9 115 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 A0A1B0GVC2 190 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 A6NIN4 97 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 TFECO14948 347 aaPredicted RBP14.83□□□□□ -0.04
COL4A1-204ENST00000543140 SCRG1O75711 98 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 GLCEO94923 617 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 HEXBP07686 556 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 ELK1P19419 428 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 SDHAP31040 664 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PNLIPRP2P54317 469 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 CDONQ4KMG0 1287 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 UBALD2Q8IYN6 164 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 Q8N402 240 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 PPP1R3EQ9H7J1 279 aa14.83□□□□□ -0.04
COL4A1-204ENST00000543140 IGHV5-10-1A0A0J9YXX1 117 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 A0A1B0GTQ1 180 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PRR32B1ATL7 298 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 ZNF354AO60765 605 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-204ENST00000543140 CFIP05156 583 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SLC2A2P11168 524 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-204ENST00000543140 GP1BBP13224 206 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 CD53P19397 219 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 EDNRAP25101 427 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SELENBP1Q13228 472 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 CDK5R1Q15078 307 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 TRAM1Q15629 374 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 ISXQ2M1V0 245 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SLC25A35Q3KQZ1 300 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SLC35D3Q5M8T2 416 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 HBMQ6B0K9 141 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PXKQ7Z7A4 578 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 EID2Q8N6I1 236 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 CEP76Q8TAP6 659 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 FAM210AQ96ND0 272 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 TSPAN32Q96QS1 320 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 C11orf54Q9H0W9 315 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-204ENST00000543140 MMP28Q9H239 520 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 B3GAT2Q9NPZ5 323 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 RASD1Q9Y272 281 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 OGG1O15527 345 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SC5DO75845 299 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PAHP00439 452 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PGCP20142 388 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 OR2B6P58173 313 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 ACY1Q03154 408 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 QPRTQ15274 297 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PMS2CLQ68D20 193 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SFXN4Q6P4A7 337 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 RABEPKQ7Z6M1 372 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 ANKRD37Q7Z713 158 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SYS1Q8N2H4 156 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 MS4A15Q8N5U1 240 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 ZBTB8BQ8NAP8 495 aaPredicted RBP14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SMIM19Q96E16 107 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 TXNDC15Q96J42 360 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 SOSTQ9BQB4 213 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 APMAPQ9HDC9 416 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 RXFP3Q9NSD7 469 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 PILRBQ9UKJ0 227 aa14.82□□□□□ -0.04
COL4A1-204ENST00000543140 WDFY4Q6ZS81 3184 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 A0A1W2PQD3 144 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 HTR3EA5X5Y0 456 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 TVP23AA6NH52 213 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 TOX3O15405 576 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-204ENST00000543140 FADS1O60427 444 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 EIF4E2O60573 245 aaKnown RBP14.81□□□□□ -0.04
COL4A1-204ENST00000543140 SLC25A12O75746 678 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 PLGP00747 810 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-204ENST00000543140 IGF2P01344 180 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 CFL1P23528 166 aaKnown RBP14.81□□□□□ -0.04
COL4A1-204ENST00000543140 FBXW4P57775 412 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 MESTQ5EB52 335 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 AKAP14Q86UN6 197 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 SAMD12Q8N8I0 201 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 CCDC74BQ96LY2 380 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 OR14A2Q96R54 314 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 TGIF2Q9GZN2 237 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 ZDBF2Q9HCK1 2354 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 A0A1W2PPC1 479 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 OR6C76A6NM76 312 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 GDF9O60383 454 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 AHCYP23526 432 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 LCN1P31025 176 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 CBFBQ13951 182 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 OTPQ5XKR4 325 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 APCDD1LQ8NCL9 501 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 KIAA1143Q96AT1 154 aaPredicted RBP14.81□□□□□ -0.04
COL4A1-204ENST00000543140 ORAI1Q96D31 301 aa14.81□□□□□ -0.04
COL4A1-204ENST00000543140 OR11A1Q9GZK7 315 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms