RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 CELF2-AS1Q8N7Q2 184 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 SLC22A11Q9NSA0 550 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 KLHL21Q9UJP4 597 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 ZNF346Q9UL40 294 aaKnown RBP14.89□□□□□ -0.03
COL4A1-204ENST00000543140 A0A1W2PQ09 198 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 SELENOFO60613 162 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 WISP1O95388 367 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 RPS4XP62701 263 aaKnown RBP14.89□□□□□ -0.03
COL4A1-204ENST00000543140 LTBQ06643 244 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 PYDC2Q56P42 97 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 LYSMD4Q5XG99 296 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 C16orf47Q6ZP98 133 aaPredicted RBP14.89□□□□□ -0.03
COL4A1-204ENST00000543140 NRARPQ7Z6K4 114 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 SLC38A9Q8NBW4 561 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 OR1N1Q8NGS0 311 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 OR13C5Q8NGS8 318 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 OR14A16Q8NHC5 309 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 CNN2Q99439 309 aaKnown RBP14.89□□□□□ -0.03
COL4A1-204ENST00000543140 SLC19A3Q9BZV2 496 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 KCNN2Q9H2S1 579 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 ZNF768Q9H5H4 540 aaKnown RBP14.89□□□□□ -0.03
COL4A1-204ENST00000543140 MMP25Q9NPA2 562 aa14.89□□□□□ -0.03
COL4A1-204ENST00000543140 NDUFB5O43674 189 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 GRPRP30550 384 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 ACTC1P68032 377 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 ACTA1P68133 377 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 POU4F2Q12837 409 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 SLC29A4Q7RTT9 530 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 CEACAM19Q7Z692 300 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 OMA1Q96E52 524 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 TSSK2Q96PF2 358 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 TMEM165Q9HC07 324 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 EXOSC3Q9NQT5 275 aaKnown RBP14.88□□□□□ -0.03
COL4A1-204ENST00000543140 A0A1W2PRG6 482 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 SNPHO15079 494 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 PLPP2O43688 288 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 SPI1P17947 270 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 ABCD3P28288 659 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 CDKN2AP42771 156 aaKnown RBP14.88□□□□□ -0.03
COL4A1-204ENST00000543140 RPS5P46782 204 aaKnown RBP14.88□□□□□ -0.03
COL4A1-204ENST00000543140 PRPS1P60891 318 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 KRR1Q13601 381 aaKnown RBP14.88□□□□□ -0.03
COL4A1-204ENST00000543140 IDNKQ5T6J7 187 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 LEG1Q6P5S2 330 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 CNIH2Q6PI25 160 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 KMT5CQ86Y97 462 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 SLC35F2Q8IXU6 374 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 ABHD4Q8TB40 342 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 NEDD4LQ96PU5 975 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 TBL1XR1Q9BZK7 514 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 RPRD1BQ9NQG5 326 aaKnown RBP14.88□□□□□ -0.03
COL4A1-204ENST00000543140 ENAMQ9NRM1 1142 aa14.88□□□□□ -0.03
COL4A1-204ENST00000543140 CFAP54Q96N23 3096 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 COL5A1P20908 1838 aaPredicted RBP14.87□□□□□ -0.03
COL4A1-204ENST00000543140 SCO2O43819 266 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TIAF1O95411 115 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 APEX1P27695 318 aaKnown RBP14.87□□□□□ -0.03
COL4A1-204ENST00000543140 CBX3Q13185 183 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 XKRXQ6PP77 449 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 COX15Q7KZN9 410 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 STT3BQ8TCJ2 826 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 GHSRQ92847 366 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TMCO6Q96DC7 493 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TMEM43Q9BTV4 400 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 A0A1W2PPK0 400 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 PSMD9O00233 223 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 ARPC3O15145 178 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TSPAN2O60636 221 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 F8A1P23610 371 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 EIF2B2P49770 351 aaKnown RBP14.87□□□□□ -0.03
COL4A1-204ENST00000543140 DIO1P49895 249 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 CTXN1P60606 82 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 DCAF7P61962 342 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 ALG10Q5BKT4 473 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 C1QL3Q5VWW1 255 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TMEM71Q6P5X7 295 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 THAP3Q8WTV1 239 aaPredicted RBP14.87□□□□□ -0.03
COL4A1-204ENST00000543140 SNX33Q8WV41 574 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 TAAR8Q969N4 342 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 PGLYRP3Q96LB9 341 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 OR6C1Q96RD1 312 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 DDOQ99489 341 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 LPAR4Q99677 370 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 LAT2Q9GZY6 243 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 GNG8Q9UK08 70 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 COPS3Q9UNS2 423 aa14.87□□□□□ -0.03
COL4A1-204ENST00000543140 ADAMTS9Q9P2N4 1935 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 MUC3AQ02505 3323 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 PDGFBP01127 241 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-204ENST00000543140 CSF3P09919 207 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 OR2T7P0C7T2 308 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 EPHA8P29322 1005 aaPredicted RBP14.86□□□□□ -0.03
COL4A1-204ENST00000543140 OR10A3P58181 314 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 PPP3R1P63098 170 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 LGALS3BPQ08380 585 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 P2RY14Q15391 338 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 UBE2J2Q8N2K1 259 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 FAM181AQ8N9Y4 354 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 OR2T27Q8NH04 317 aa14.86□□□□□ -0.03
COL4A1-204ENST00000543140 PELI1Q96FA3 418 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms